Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EIF3FO00303 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EIF3FO00303 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EIF3FO00303 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EIF3FO00303 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
EIF3FO00303 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.52■□□□□ 0.88
EIF3FO00303 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.52■□□□□ 0.88
EIF3FO00303 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.52■□□□□ 0.88
EIF3FO00303 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.52■□□□□ 0.88
EIF3FO00303 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EIF3FO00303 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
EIF3FO00303 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.51■□□□□ 0.87
EIF3FO00303 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.51■□□□□ 0.87
EIF3FO00303 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3FO00303 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
EIF3FO00303 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EIF3FO00303 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3FO00303 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.51■□□□□ 0.87
EIF3FO00303 KRT18P20-201ENST00000548986 1279 ntBASIC20.51■□□□□ 0.87
EIF3FO00303 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3FO00303 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3FO00303 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3FO00303 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.51■□□□□ 0.87
EIF3FO00303 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EIF3FO00303 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EIF3FO00303 AC061975.6-201ENST00000579045 1553 ntBASIC20.51■□□□□ 0.87
EIF3FO00303 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
EIF3FO00303 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.5■□□□□ 0.87
EIF3FO00303 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3FO00303 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3FO00303 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3FO00303 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
EIF3FO00303 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3FO00303 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.5■□□□□ 0.87
EIF3FO00303 AC097381.1-201ENST00000429019 1296 ntBASIC20.5■□□□□ 0.87
EIF3FO00303 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.5■□□□□ 0.87
EIF3FO00303 AC120498.10-201ENST00000621827 505 ntBASIC20.5■□□□□ 0.87
EIF3FO00303 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
EIF3FO00303 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
EIF3FO00303 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3FO00303 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
EIF3FO00303 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
EIF3FO00303 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.49■□□□□ 0.87
EIF3FO00303 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3FO00303 AC005229.4-201ENST00000610085 2198 ntBASIC20.49■□□□□ 0.87
EIF3FO00303 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3FO00303 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3FO00303 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3FO00303 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3FO00303 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3FO00303 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3FO00303 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.49■□□□□ 0.87
EIF3FO00303 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3FO00303 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
EIF3FO00303 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.49■□□□□ 0.87
EIF3FO00303 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.49■□□□□ 0.87
EIF3FO00303 AC104187.1-201ENST00000607510 612 ntBASIC20.49■□□□□ 0.87
EIF3FO00303 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3FO00303 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3FO00303 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3FO00303 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.49■□□□□ 0.87
EIF3FO00303 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3FO00303 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
EIF3FO00303 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3FO00303 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
EIF3FO00303 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
EIF3FO00303 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EIF3FO00303 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3FO00303 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3FO00303 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.48■□□□□ 0.87
EIF3FO00303 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3FO00303 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
EIF3FO00303 AL137060.1-201ENST00000618151 2648 ntBASIC20.48■□□□□ 0.87
EIF3FO00303 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.48■□□□□ 0.87
EIF3FO00303 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3FO00303 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3FO00303 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
EIF3FO00303 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.48■□□□□ 0.87
EIF3FO00303 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3FO00303 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.48■□□□□ 0.87
EIF3FO00303 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3FO00303 MIR6821-201ENST00000617625 74 ntBASIC20.48■□□□□ 0.87
EIF3FO00303 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.48■□□□□ 0.87
EIF3FO00303 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3FO00303 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
EIF3FO00303 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
EIF3FO00303 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EIF3FO00303 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EIF3FO00303 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.47■□□□□ 0.87
EIF3FO00303 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EIF3FO00303 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.47■□□□□ 0.87
EIF3FO00303 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.47■□□□□ 0.87
EIF3FO00303 AP001160.3-201ENST00000601484 763 ntBASIC20.47■□□□□ 0.87
EIF3FO00303 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
EIF3FO00303 AF106564.1-201ENST00000607058 2553 ntBASIC20.47■□□□□ 0.87
EIF3FO00303 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EIF3FO00303 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.47■□□□□ 0.87
EIF3FO00303 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
EIF3FO00303 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.47■□□□□ 0.87
EIF3FO00303 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms