Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 AC080038.1-201ENST00000611274 1154 ntBASIC21.97■■□□□ 1.11
YJEFN3A6XGL0 Z98882.1-201ENST00000622160 2253 ntBASIC21.97■■□□□ 1.11
YJEFN3A6XGL0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
YJEFN3A6XGL0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
YJEFN3A6XGL0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
YJEFN3A6XGL0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
YJEFN3A6XGL0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
YJEFN3A6XGL0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
YJEFN3A6XGL0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
YJEFN3A6XGL0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.96■■□□□ 1.11
YJEFN3A6XGL0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.96■■□□□ 1.11
YJEFN3A6XGL0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.96■■□□□ 1.11
YJEFN3A6XGL0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.96■■□□□ 1.11
YJEFN3A6XGL0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
YJEFN3A6XGL0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.96■■□□□ 1.11
YJEFN3A6XGL0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.96■■□□□ 1.11
YJEFN3A6XGL0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.96■■□□□ 1.11
YJEFN3A6XGL0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.96■■□□□ 1.11
YJEFN3A6XGL0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
YJEFN3A6XGL0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
YJEFN3A6XGL0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
YJEFN3A6XGL0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
YJEFN3A6XGL0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
YJEFN3A6XGL0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.95■■□□□ 1.1
YJEFN3A6XGL0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
YJEFN3A6XGL0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
YJEFN3A6XGL0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.95■■□□□ 1.1
YJEFN3A6XGL0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.95■■□□□ 1.1
YJEFN3A6XGL0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.95■■□□□ 1.1
YJEFN3A6XGL0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
YJEFN3A6XGL0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
YJEFN3A6XGL0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
YJEFN3A6XGL0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
YJEFN3A6XGL0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
YJEFN3A6XGL0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
YJEFN3A6XGL0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.94■■□□□ 1.1
YJEFN3A6XGL0 DUX4L16-201ENST00000555130 1264 ntBASIC21.94■■□□□ 1.1
YJEFN3A6XGL0 AC073111.5-205ENST00000641717 521 ntBASIC21.94■■□□□ 1.1
YJEFN3A6XGL0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
YJEFN3A6XGL0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
YJEFN3A6XGL0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.94■■□□□ 1.1
YJEFN3A6XGL0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
YJEFN3A6XGL0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
YJEFN3A6XGL0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
YJEFN3A6XGL0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
YJEFN3A6XGL0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.93■■□□□ 1.1
YJEFN3A6XGL0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.93■■□□□ 1.1
YJEFN3A6XGL0 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.93■■□□□ 1.1
YJEFN3A6XGL0 CDCA4P2-201ENST00000441182 718 ntBASIC21.93■■□□□ 1.1
YJEFN3A6XGL0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.93■■□□□ 1.1
YJEFN3A6XGL0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.93■■□□□ 1.1
YJEFN3A6XGL0 AC010536.3-201ENST00000620306 533 ntBASIC21.93■■□□□ 1.1
YJEFN3A6XGL0 RARRES2P11-201ENST00000635158 484 ntBASIC21.93■■□□□ 1.1
YJEFN3A6XGL0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
YJEFN3A6XGL0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
YJEFN3A6XGL0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
YJEFN3A6XGL0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
YJEFN3A6XGL0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
YJEFN3A6XGL0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
YJEFN3A6XGL0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
YJEFN3A6XGL0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
YJEFN3A6XGL0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
YJEFN3A6XGL0 RAP2CP1-201ENST00000605103 478 ntBASIC21.92■■□□□ 1.1
YJEFN3A6XGL0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
YJEFN3A6XGL0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
YJEFN3A6XGL0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.92■■□□□ 1.1
YJEFN3A6XGL0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
YJEFN3A6XGL0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
YJEFN3A6XGL0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
YJEFN3A6XGL0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.9■■□□□ 1.1
YJEFN3A6XGL0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.9■■□□□ 1.1
YJEFN3A6XGL0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
YJEFN3A6XGL0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
YJEFN3A6XGL0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
YJEFN3A6XGL0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
YJEFN3A6XGL0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
YJEFN3A6XGL0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
YJEFN3A6XGL0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
YJEFN3A6XGL0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
YJEFN3A6XGL0 RBM17P2-201ENST00000616397 1405 ntBASIC21.89■■□□□ 1.1
YJEFN3A6XGL0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms