Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SHISA3A0PJX4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SHISA3A0PJX4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SHISA3A0PJX4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHISA3A0PJX4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SHISA3A0PJX4 AC010141.3-201ENST00000456659 717 ntBASIC18.31■□□□□ 0.52
SHISA3A0PJX4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.31■□□□□ 0.52
SHISA3A0PJX4 AC241377.3-202ENST00000626088 1088 ntBASIC18.31■□□□□ 0.52
SHISA3A0PJX4 AC241585.3-202ENST00000628937 1088 ntBASIC18.31■□□□□ 0.52
SHISA3A0PJX4 AC245100.8-202ENST00000629247 1058 ntBASIC18.31■□□□□ 0.52
SHISA3A0PJX4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHISA3A0PJX4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHISA3A0PJX4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SHISA3A0PJX4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SHISA3A0PJX4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SHISA3A0PJX4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SHISA3A0PJX4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.31■□□□□ 0.52
SHISA3A0PJX4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHISA3A0PJX4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SHISA3A0PJX4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHISA3A0PJX4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.3■□□□□ 0.52
SHISA3A0PJX4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHISA3A0PJX4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHISA3A0PJX4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHISA3A0PJX4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.3■□□□□ 0.52
SHISA3A0PJX4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SHISA3A0PJX4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.3■□□□□ 0.52
SHISA3A0PJX4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.3■□□□□ 0.52
SHISA3A0PJX4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SHISA3A0PJX4 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.3■□□□□ 0.52
SHISA3A0PJX4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.3■□□□□ 0.52
SHISA3A0PJX4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHISA3A0PJX4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SHISA3A0PJX4 AC121338.2-201ENST00000622535 1744 ntBASIC18.29■□□□□ 0.52
SHISA3A0PJX4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHISA3A0PJX4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SHISA3A0PJX4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SHISA3A0PJX4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SHISA3A0PJX4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHISA3A0PJX4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHISA3A0PJX4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHISA3A0PJX4 OR2I1P-207ENST00000453522 948 ntBASIC18.29■□□□□ 0.52
SHISA3A0PJX4 AL034346.1-201ENST00000568244 1277 ntBASIC18.29■□□□□ 0.52
SHISA3A0PJX4 AL117332.1-201ENST00000622628 974 ntBASIC18.29■□□□□ 0.52
SHISA3A0PJX4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHISA3A0PJX4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SHISA3A0PJX4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SHISA3A0PJX4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.29■□□□□ 0.52
SHISA3A0PJX4 AC099778.1-201ENST00000568593 1911 ntBASIC18.29■□□□□ 0.52
SHISA3A0PJX4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 AC010997.5-201ENST00000609182 354 ntBASIC18.28■□□□□ 0.52
SHISA3A0PJX4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.28■□□□□ 0.52
SHISA3A0PJX4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 AC010525.1-201ENST00000585559 441 ntBASIC18.27■□□□□ 0.52
SHISA3A0PJX4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.27■□□□□ 0.52
SHISA3A0PJX4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SHISA3A0PJX4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
SHISA3A0PJX4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SHISA3A0PJX4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SHISA3A0PJX4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.27■□□□□ 0.51
SHISA3A0PJX4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SHISA3A0PJX4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SHISA3A0PJX4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
SHISA3A0PJX4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms