Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 AC106739.1-201ENST00000617035 715 ntBASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
TRBV10-1A0A0K0K1A3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 MIR572-201ENST00000384983 95 ntBASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 AL355001.2-201ENST00000620617 1191 ntBASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV10-1A0A0K0K1A3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV10-1A0A0K0K1A3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRBV10-1A0A0K0K1A3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.77□□□□□ -0.04
TRBV10-1A0A0K0K1A3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV10-1A0A0K0K1A3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV10-1A0A0K0K1A3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV10-1A0A0K0K1A3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.77□□□□□ -0.04
TRBV10-1A0A0K0K1A3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV10-1A0A0K0K1A3 RASA4CP-201ENST00000424092 1398 ntBASIC14.77□□□□□ -0.04
TRBV10-1A0A0K0K1A3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 AC096631.2-201ENST00000436136 790 ntBASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 AC006128.1-201ENST00000624704 1661 ntBASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV10-1A0A0K0K1A3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 AC091305.1-201ENST00000479476 895 ntBASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 AP001330.3-201ENST00000520123 633 ntBASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV10-1A0A0K0K1A3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV10-1A0A0K0K1A3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms