Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AL589743.5-201ENST00000616611 1050 ntBASIC26.95■■□□□ 1.9
LOC102724428A0A0B4J2F2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
LOC102724428A0A0B4J2F2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
LOC102724428A0A0B4J2F2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.95■■□□□ 1.9
LOC102724428A0A0B4J2F2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.95■■□□□ 1.9
LOC102724428A0A0B4J2F2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LOC102724428A0A0B4J2F2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
LOC102724428A0A0B4J2F2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.94■■□□□ 1.9
LOC102724428A0A0B4J2F2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
LOC102724428A0A0B4J2F2 MIR718-201ENST00000390190 70 ntBASIC26.94■■□□□ 1.9
LOC102724428A0A0B4J2F2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
LOC102724428A0A0B4J2F2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC26.94■■□□□ 1.9
LOC102724428A0A0B4J2F2 C1QBPP2-201ENST00000528754 825 ntBASIC26.94■■□□□ 1.9
LOC102724428A0A0B4J2F2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.94■■□□□ 1.9
LOC102724428A0A0B4J2F2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.94■■□□□ 1.9
LOC102724428A0A0B4J2F2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LOC102724428A0A0B4J2F2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
LOC102724428A0A0B4J2F2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
LOC102724428A0A0B4J2F2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.93■■□□□ 1.9
LOC102724428A0A0B4J2F2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LOC102724428A0A0B4J2F2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC26.93■■□□□ 1.9
LOC102724428A0A0B4J2F2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LOC102724428A0A0B4J2F2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
LOC102724428A0A0B4J2F2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC26.93■■□□□ 1.9
LOC102724428A0A0B4J2F2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC26.93■■□□□ 1.9
LOC102724428A0A0B4J2F2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
LOC102724428A0A0B4J2F2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
LOC102724428A0A0B4J2F2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.92■■□□□ 1.9
LOC102724428A0A0B4J2F2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
LOC102724428A0A0B4J2F2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.92■■□□□ 1.9
LOC102724428A0A0B4J2F2 MCRIP2P1-201ENST00000394346 511 ntBASIC26.92■■□□□ 1.9
LOC102724428A0A0B4J2F2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.92■■□□□ 1.9
LOC102724428A0A0B4J2F2 AC245052.3-201ENST00000450182 901 ntBASIC26.92■■□□□ 1.9
LOC102724428A0A0B4J2F2 MIR4497-201ENST00000583208 89 ntBASIC26.92■■□□□ 1.9
LOC102724428A0A0B4J2F2 FAM197Y4-202ENST00000622692 608 ntBASIC26.92■■□□□ 1.9
LOC102724428A0A0B4J2F2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.91■■□□□ 1.9
LOC102724428A0A0B4J2F2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
LOC102724428A0A0B4J2F2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
LOC102724428A0A0B4J2F2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
LOC102724428A0A0B4J2F2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.91■■□□□ 1.9
LOC102724428A0A0B4J2F2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.91■■□□□ 1.9
LOC102724428A0A0B4J2F2 AC233263.1-201ENST00000578059 224 ntBASIC26.91■■□□□ 1.9
LOC102724428A0A0B4J2F2 RN7SL471P-201ENST00000580476 299 ntBASIC26.91■■□□□ 1.9
LOC102724428A0A0B4J2F2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.91■■□□□ 1.9
LOC102724428A0A0B4J2F2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
LOC102724428A0A0B4J2F2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
LOC102724428A0A0B4J2F2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 AC093323.1-202ENST00000635031 2045 ntBASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 AC092368.3-202ENST00000574180 1591 ntBASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 Z99916.2-201ENST00000604037 246 ntBASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
LOC102724428A0A0B4J2F2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
LOC102724428A0A0B4J2F2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
LOC102724428A0A0B4J2F2 KRT17P3-201ENST00000420566 1262 ntBASIC26.89■■□□□ 1.9
LOC102724428A0A0B4J2F2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.89■■□□□ 1.9
LOC102724428A0A0B4J2F2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
LOC102724428A0A0B4J2F2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.89■■□□□ 1.9
LOC102724428A0A0B4J2F2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
LOC102724428A0A0B4J2F2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
LOC102724428A0A0B4J2F2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
LOC102724428A0A0B4J2F2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
LOC102724428A0A0B4J2F2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
LOC102724428A0A0B4J2F2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LOC102724428A0A0B4J2F2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
LOC102724428A0A0B4J2F2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LOC102724428A0A0B4J2F2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
LOC102724428A0A0B4J2F2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
LOC102724428A0A0B4J2F2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.88■■□□□ 1.89
LOC102724428A0A0B4J2F2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
LOC102724428A0A0B4J2F2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.88■■□□□ 1.89
LOC102724428A0A0B4J2F2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
LOC102724428A0A0B4J2F2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
LOC102724428A0A0B4J2F2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LOC102724428A0A0B4J2F2 KRT18P68-201ENST00000392293 1000 ntBASIC26.87■■□□□ 1.89
LOC102724428A0A0B4J2F2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.87■■□□□ 1.89
LOC102724428A0A0B4J2F2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.87■■□□□ 1.89
LOC102724428A0A0B4J2F2 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.87■■□□□ 1.89
LOC102724428A0A0B4J2F2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC26.87■■□□□ 1.89
LOC102724428A0A0B4J2F2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.87■■□□□ 1.89
LOC102724428A0A0B4J2F2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
LOC102724428A0A0B4J2F2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
LOC102724428A0A0B4J2F2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
LOC102724428A0A0B4J2F2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms