Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 AL034346.1-201ENST00000568244 1277 ntBASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-1A0A0A6YYK1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PLK5-205ENST00000642079 1969 ntBASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 AC006128.1-201ENST00000624704 1661 ntBASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 GABARAPL3-202ENST00000624044 1851 ntBASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-1A0A0A6YYK1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 AFG3L1P-217ENST00000557444 2447 ntBASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-1A0A0A6YYK1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV8-1A0A0A6YYK1 AC007952.6-201ENST00000573168 2673 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms