Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV5-3A0A0A0MS03 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 BX005040.4-201ENST00000637145 1518 ntBASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 AC007225.1-201ENST00000566331 1836 ntBASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 UNC93B3-201ENST00000308076 687 ntBASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 AL136116.3-201ENST00000402907 1138 ntBASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 AC005224.4-201ENST00000583262 1652 ntBASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.68■□□□□ 0.74
TRBV5-3A0A0A0MS03 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 AC024257.2-201ENST00000549699 147 ntBASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV5-3A0A0A0MS03 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-3A0A0A0MS03 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-3A0A0A0MS03 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRBV5-3A0A0A0MS03 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-3A0A0A0MS03 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-3A0A0A0MS03 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-3A0A0A0MS03 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-3A0A0A0MS03 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-3A0A0A0MS03 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-3A0A0A0MS03 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV5-3A0A0A0MS03 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRBV5-3A0A0A0MS03 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 AC126544.1-201ENST00000580842 1059 ntBASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV5-3A0A0A0MS03 AC020907.5-201ENST00000624372 1936 ntBASIC19.64■□□□□ 0.74
TRBV5-3A0A0A0MS03 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TRBV5-3A0A0A0MS03 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.74
TRBV5-3A0A0A0MS03 AL121603.2-201ENST00000557373 2117 ntBASIC19.64■□□□□ 0.74
TRBV5-3A0A0A0MS03 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
TRBV5-3A0A0A0MS03 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.64■□□□□ 0.74
TRBV5-3A0A0A0MS03 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.74
TRBV5-3A0A0A0MS03 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-3A0A0A0MS03 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.64■□□□□ 0.73
TRBV5-3A0A0A0MS03 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRBV5-3A0A0A0MS03 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.64■□□□□ 0.73
TRBV5-3A0A0A0MS03 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-3A0A0A0MS03 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.64■□□□□ 0.73
TRBV5-3A0A0A0MS03 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRBV5-3A0A0A0MS03 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-3A0A0A0MS03 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
TRBV5-3A0A0A0MS03 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms