Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC187A0A096LP49 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC187A0A096LP49 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC187A0A096LP49 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC187A0A096LP49 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCDC187A0A096LP49 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC187A0A096LP49 AC245052.3-201ENST00000450182 901 ntBASIC19.95■□□□□ 0.78
CCDC187A0A096LP49 UNC93B4-201ENST00000505679 747 ntBASIC19.95■□□□□ 0.78
CCDC187A0A096LP49 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC187A0A096LP49 AC100791.3-201ENST00000617619 330 ntBASIC19.95■□□□□ 0.78
CCDC187A0A096LP49 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC187A0A096LP49 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC187A0A096LP49 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
CCDC187A0A096LP49 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC187A0A096LP49 AC003102.1-202ENST00000563394 1796 ntBASIC19.94■□□□□ 0.78
CCDC187A0A096LP49 KRT17P1-201ENST00000399211 1546 ntBASIC19.94■□□□□ 0.78
CCDC187A0A096LP49 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC187A0A096LP49 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC187A0A096LP49 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC187A0A096LP49 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC187A0A096LP49 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC187A0A096LP49 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC187A0A096LP49 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
CCDC187A0A096LP49 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC187A0A096LP49 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 AC091799.1-201ENST00000422823 811 ntBASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 AL355472.2-201ENST00000422958 438 ntBASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 CYP2T3P-201ENST00000601990 817 ntBASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC187A0A096LP49 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 AL596275.1-201ENST00000423464 877 ntBASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 AC060766.5-201ENST00000590539 871 ntBASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC187A0A096LP49 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC187A0A096LP49 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
CCDC187A0A096LP49 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC187A0A096LP49 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC187A0A096LP49 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC187A0A096LP49 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC187A0A096LP49 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC187A0A096LP49 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC187A0A096LP49 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC187A0A096LP49 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.91■□□□□ 0.78
CCDC187A0A096LP49 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC187A0A096LP49 HLA-B-256ENST00000639848 1089 ntBASIC19.91■□□□□ 0.78
CCDC187A0A096LP49 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC187A0A096LP49 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 AL589743.5-201ENST00000616611 1050 ntBASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC187A0A096LP49 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC187A0A096LP49 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CCDC187A0A096LP49 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
CCDC187A0A096LP49 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC187A0A096LP49 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CCDC187A0A096LP49 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms