Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Hdac6Q9Z2V5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Hdac6Q9Z2V5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC32.32■■■□□ 2.77
Hdac6Q9Z2V5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Hdac6Q9Z2V5 Nkain2-201ENSMUST00000092602 558 ntBASIC32.31■■■□□ 2.76
Hdac6Q9Z2V5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Hdac6Q9Z2V5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Hdac6Q9Z2V5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Hdac6Q9Z2V5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Hdac6Q9Z2V5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
Hdac6Q9Z2V5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC32.27■■■□□ 2.76
Hdac6Q9Z2V5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC32.27■■■□□ 2.76
Hdac6Q9Z2V5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
Hdac6Q9Z2V5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
Hdac6Q9Z2V5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Hdac6Q9Z2V5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC32.26■■■□□ 2.75
Hdac6Q9Z2V5 Gm30346-201ENSMUST00000218641 1699 ntBASIC32.25■■■□□ 2.75
Hdac6Q9Z2V5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Hdac6Q9Z2V5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Hdac6Q9Z2V5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Hdac6Q9Z2V5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Hdac6Q9Z2V5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Hdac6Q9Z2V5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Hdac6Q9Z2V5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Hdac6Q9Z2V5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
Hdac6Q9Z2V5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Hdac6Q9Z2V5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Hdac6Q9Z2V5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Hdac6Q9Z2V5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Hdac6Q9Z2V5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Hdac6Q9Z2V5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC32.19■■■□□ 2.74
Hdac6Q9Z2V5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Hdac6Q9Z2V5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Hdac6Q9Z2V5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC32.14■■■□□ 2.74
Hdac6Q9Z2V5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Hdac6Q9Z2V5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.73
Hdac6Q9Z2V5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC32.12■■■□□ 2.73
Hdac6Q9Z2V5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
Hdac6Q9Z2V5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Hdac6Q9Z2V5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Hdac6Q9Z2V5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Hdac6Q9Z2V5 Gm7432-201ENSMUST00000210343 879 ntBASIC32.08■■■□□ 2.73
Hdac6Q9Z2V5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Hdac6Q9Z2V5 Gm2415-204ENSMUST00000190235 2004 ntBASIC32.07■■■□□ 2.72
Hdac6Q9Z2V5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Hdac6Q9Z2V5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
Hdac6Q9Z2V5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Hdac6Q9Z2V5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Hdac6Q9Z2V5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Hdac6Q9Z2V5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC32■■■□□ 2.71
Hdac6Q9Z2V5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
Hdac6Q9Z2V5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Hdac6Q9Z2V5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Hdac6Q9Z2V5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Hdac6Q9Z2V5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC31.96■■■□□ 2.71
Hdac6Q9Z2V5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Hdac6Q9Z2V5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Hdac6Q9Z2V5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Hdac6Q9Z2V5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Hdac6Q9Z2V5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Hdac6Q9Z2V5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
Hdac6Q9Z2V5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.9■■■□□ 2.7
Hdac6Q9Z2V5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.89■■■□□ 2.7
Hdac6Q9Z2V5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Hdac6Q9Z2V5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.88■■■□□ 2.69
Hdac6Q9Z2V5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Hdac6Q9Z2V5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
Hdac6Q9Z2V5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.87■■■□□ 2.69
Hdac6Q9Z2V5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Hdac6Q9Z2V5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.86■■■□□ 2.69
Hdac6Q9Z2V5 Gm11599-201ENSMUST00000118720 878 ntBASIC31.84■■■□□ 2.69
Hdac6Q9Z2V5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
Hdac6Q9Z2V5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Hdac6Q9Z2V5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Hdac6Q9Z2V5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Hdac6Q9Z2V5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC31.81■■■□□ 2.68
Hdac6Q9Z2V5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
Hdac6Q9Z2V5 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.8■■■□□ 2.68
Hdac6Q9Z2V5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Hdac6Q9Z2V5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC31.79■■■□□ 2.68
Hdac6Q9Z2V5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.75■■■□□ 2.67
Hdac6Q9Z2V5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Hdac6Q9Z2V5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31.73■■■□□ 2.67
Hdac6Q9Z2V5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC31.72■■■□□ 2.67
Hdac6Q9Z2V5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Hdac6Q9Z2V5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Hdac6Q9Z2V5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.69■■■□□ 2.66
Hdac6Q9Z2V5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Hdac6Q9Z2V5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.69■■■□□ 2.66
Hdac6Q9Z2V5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Hdac6Q9Z2V5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Hdac6Q9Z2V5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Hdac6Q9Z2V5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Hdac6Q9Z2V5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Hdac6Q9Z2V5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Hdac6Q9Z2V5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.65■■■□□ 2.66
Hdac6Q9Z2V5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.64■■■□□ 2.66
Hdac6Q9Z2V5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Hdac6Q9Z2V5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Hdac6Q9Z2V5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC31.63■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms