Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
NR2E3Q9Y5X4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
NR2E3Q9Y5X4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.24■■■□□ 2.43
NR2E3Q9Y5X4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
NR2E3Q9Y5X4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.22■■■□□ 2.43
NR2E3Q9Y5X4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
NR2E3Q9Y5X4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.21■■■□□ 2.43
NR2E3Q9Y5X4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.2■■■□□ 2.43
NR2E3Q9Y5X4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
NR2E3Q9Y5X4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
NR2E3Q9Y5X4 ABHD17AP5-201ENST00000580133 923 ntBASIC30.19■■■□□ 2.42
NR2E3Q9Y5X4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.17■■■□□ 2.42
NR2E3Q9Y5X4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NR2E3Q9Y5X4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.16■■■□□ 2.42
NR2E3Q9Y5X4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
NR2E3Q9Y5X4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.16■■■□□ 2.42
NR2E3Q9Y5X4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.15■■■□□ 2.42
NR2E3Q9Y5X4 RARRES2P2-201ENST00000394842 485 ntBASIC30.15■■■□□ 2.42
NR2E3Q9Y5X4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NR2E3Q9Y5X4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
NR2E3Q9Y5X4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.13■■■□□ 2.41
NR2E3Q9Y5X4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
NR2E3Q9Y5X4 MIR6090-201ENST00000622481 60 ntBASIC30.12■■■□□ 2.41
NR2E3Q9Y5X4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NR2E3Q9Y5X4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
NR2E3Q9Y5X4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.1■■■□□ 2.41
NR2E3Q9Y5X4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
NR2E3Q9Y5X4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
NR2E3Q9Y5X4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
NR2E3Q9Y5X4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.09■■■□□ 2.41
NR2E3Q9Y5X4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.09■■■□□ 2.41
NR2E3Q9Y5X4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
NR2E3Q9Y5X4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
NR2E3Q9Y5X4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
NR2E3Q9Y5X4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
NR2E3Q9Y5X4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.05■■■□□ 2.4
NR2E3Q9Y5X4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.05■■■□□ 2.4
NR2E3Q9Y5X4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
NR2E3Q9Y5X4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.04■■■□□ 2.4
NR2E3Q9Y5X4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
NR2E3Q9Y5X4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
NR2E3Q9Y5X4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.02■■■□□ 2.4
NR2E3Q9Y5X4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.4
NR2E3Q9Y5X4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.01■■■□□ 2.39
NR2E3Q9Y5X4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.01■■■□□ 2.39
NR2E3Q9Y5X4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30■■■□□ 2.39
NR2E3Q9Y5X4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
NR2E3Q9Y5X4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.39
NR2E3Q9Y5X4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.99■■■□□ 2.39
NR2E3Q9Y5X4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
NR2E3Q9Y5X4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.98■■■□□ 2.39
NR2E3Q9Y5X4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.97■■■□□ 2.39
NR2E3Q9Y5X4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
NR2E3Q9Y5X4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
NR2E3Q9Y5X4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.93■■■□□ 2.38
NR2E3Q9Y5X4 DUX4L13-201ENST00000554103 1267 ntBASIC29.92■■■□□ 2.38
NR2E3Q9Y5X4 DUX4L15-201ENST00000611059 1267 ntBASIC29.92■■■□□ 2.38
NR2E3Q9Y5X4 DUX4L23-201ENST00000615195 1269 ntBASIC29.92■■■□□ 2.38
NR2E3Q9Y5X4 DUX4L24-201ENST00000617576 1269 ntBASIC29.92■■■□□ 2.38
NR2E3Q9Y5X4 DUX4L22-201ENST00000618238 1269 ntBASIC29.92■■■□□ 2.38
NR2E3Q9Y5X4 DUX4L20-201ENST00000619712 1269 ntBASIC29.92■■■□□ 2.38
NR2E3Q9Y5X4 DUX4L21-201ENST00000622058 1269 ntBASIC29.92■■■□□ 2.38
NR2E3Q9Y5X4 DUX4L10-201ENST00000622460 1267 ntBASIC29.92■■■□□ 2.38
NR2E3Q9Y5X4 DUX4L25-201ENST00000624915 1269 ntBASIC29.92■■■□□ 2.38
NR2E3Q9Y5X4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
NR2E3Q9Y5X4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
NR2E3Q9Y5X4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
NR2E3Q9Y5X4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
NR2E3Q9Y5X4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
NR2E3Q9Y5X4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
NR2E3Q9Y5X4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
NR2E3Q9Y5X4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
NR2E3Q9Y5X4 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
NR2E3Q9Y5X4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
NR2E3Q9Y5X4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
NR2E3Q9Y5X4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
NR2E3Q9Y5X4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
NR2E3Q9Y5X4 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.88■■■□□ 2.37
NR2E3Q9Y5X4 RNF126P1-201ENST00000567452 1320 ntBASIC29.88■■■□□ 2.37
NR2E3Q9Y5X4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.87■■■□□ 2.37
NR2E3Q9Y5X4 GPX1-201ENST00000419349 1106 ntBASIC29.86■■■□□ 2.37
NR2E3Q9Y5X4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.85■■■□□ 2.37
NR2E3Q9Y5X4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
NR2E3Q9Y5X4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.84■■■□□ 2.37
NR2E3Q9Y5X4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
NR2E3Q9Y5X4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
NR2E3Q9Y5X4 AC012354.3-201ENST00000623734 483 ntBASIC29.83■■■□□ 2.37
NR2E3Q9Y5X4 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
NR2E3Q9Y5X4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
NR2E3Q9Y5X4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.82■■■□□ 2.36
NR2E3Q9Y5X4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
NR2E3Q9Y5X4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
NR2E3Q9Y5X4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC29.8■■■□□ 2.36
NR2E3Q9Y5X4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NR2E3Q9Y5X4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NR2E3Q9Y5X4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.79■■■□□ 2.36
NR2E3Q9Y5X4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
NR2E3Q9Y5X4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.77■■■□□ 2.36
NR2E3Q9Y5X4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
NR2E3Q9Y5X4 NTF6A-201ENST00000591175 560 ntBASIC29.76■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms