Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
LEMD3Q9Y2U8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
LEMD3Q9Y2U8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC33.02■■■□□ 2.88
LEMD3Q9Y2U8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC33■■■□□ 2.87
LEMD3Q9Y2U8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC33■■■□□ 2.87
LEMD3Q9Y2U8 HLA-V-202ENST00000446817 847 ntBASIC33■■■□□ 2.87
LEMD3Q9Y2U8 AC108673.1-201ENST00000510422 1159 ntBASIC33■■■□□ 2.87
LEMD3Q9Y2U8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC33■■■□□ 2.87
LEMD3Q9Y2U8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
LEMD3Q9Y2U8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
LEMD3Q9Y2U8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
LEMD3Q9Y2U8 AC021231.2-201ENST00000594613 730 ntBASIC32.98■■■□□ 2.87
LEMD3Q9Y2U8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.97■■■□□ 2.87
LEMD3Q9Y2U8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
LEMD3Q9Y2U8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
LEMD3Q9Y2U8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
LEMD3Q9Y2U8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC32.95■■■□□ 2.87
LEMD3Q9Y2U8 MIR6090-201ENST00000622481 60 ntBASIC32.95■■■□□ 2.87
LEMD3Q9Y2U8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
LEMD3Q9Y2U8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
LEMD3Q9Y2U8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
LEMD3Q9Y2U8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
LEMD3Q9Y2U8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
LEMD3Q9Y2U8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.92■■■□□ 2.86
LEMD3Q9Y2U8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
LEMD3Q9Y2U8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
LEMD3Q9Y2U8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
LEMD3Q9Y2U8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.91■■■□□ 2.86
LEMD3Q9Y2U8 AC120057.4-201ENST00000624722 1615 ntBASIC32.89■■■□□ 2.86
LEMD3Q9Y2U8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.86
LEMD3Q9Y2U8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.88■■■□□ 2.85
LEMD3Q9Y2U8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
LEMD3Q9Y2U8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC32.88■■■□□ 2.85
LEMD3Q9Y2U8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
LEMD3Q9Y2U8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC32.87■■■□□ 2.85
LEMD3Q9Y2U8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
LEMD3Q9Y2U8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.86■■■□□ 2.85
LEMD3Q9Y2U8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.86■■■□□ 2.85
LEMD3Q9Y2U8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC32.85■■■□□ 2.85
LEMD3Q9Y2U8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
LEMD3Q9Y2U8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.84■■■□□ 2.85
LEMD3Q9Y2U8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC32.82■■■□□ 2.85
LEMD3Q9Y2U8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.8■■■□□ 2.84
LEMD3Q9Y2U8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
LEMD3Q9Y2U8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC32.79■■■□□ 2.84
LEMD3Q9Y2U8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.78■■■□□ 2.84
LEMD3Q9Y2U8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.78■■■□□ 2.84
LEMD3Q9Y2U8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
LEMD3Q9Y2U8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.77■■■□□ 2.84
LEMD3Q9Y2U8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
LEMD3Q9Y2U8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.75■■■□□ 2.83
LEMD3Q9Y2U8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
LEMD3Q9Y2U8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
LEMD3Q9Y2U8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.73■■■□□ 2.83
LEMD3Q9Y2U8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.72■■■□□ 2.83
LEMD3Q9Y2U8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
LEMD3Q9Y2U8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC32.71■■■□□ 2.83
LEMD3Q9Y2U8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
LEMD3Q9Y2U8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.7■■■□□ 2.83
LEMD3Q9Y2U8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.7■■■□□ 2.83
LEMD3Q9Y2U8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.7■■■□□ 2.83
LEMD3Q9Y2U8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.7■■■□□ 2.83
LEMD3Q9Y2U8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
LEMD3Q9Y2U8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
LEMD3Q9Y2U8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC32.68■■■□□ 2.82
LEMD3Q9Y2U8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
LEMD3Q9Y2U8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
LEMD3Q9Y2U8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
LEMD3Q9Y2U8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.65■■■□□ 2.82
LEMD3Q9Y2U8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
LEMD3Q9Y2U8 MIR639-201ENST00000384974 98 ntBASIC32.64■■■□□ 2.82
LEMD3Q9Y2U8 LINC01971-201ENST00000617888 1048 ntBASIC32.64■■■□□ 2.82
LEMD3Q9Y2U8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
LEMD3Q9Y2U8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
LEMD3Q9Y2U8 MIR3648-2-201ENST00000581792 180 ntBASIC32.61■■■□□ 2.81
LEMD3Q9Y2U8 MIR3648-1-201ENST00000615959 180 ntBASIC32.61■■■□□ 2.81
LEMD3Q9Y2U8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.61■■■□□ 2.81
LEMD3Q9Y2U8 MIR4449-201ENST00000578365 66 ntBASIC32.6■■■□□ 2.81
LEMD3Q9Y2U8 DUX4L11-201ENST00000611504 1267 ntBASIC32.6■■■□□ 2.81
LEMD3Q9Y2U8 DUX4L12-201ENST00000614593 1267 ntBASIC32.6■■■□□ 2.81
LEMD3Q9Y2U8 DUX4L14-201ENST00000621227 1267 ntBASIC32.6■■■□□ 2.81
LEMD3Q9Y2U8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
LEMD3Q9Y2U8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
LEMD3Q9Y2U8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.59■■■□□ 2.81
LEMD3Q9Y2U8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC32.59■■■□□ 2.81
LEMD3Q9Y2U8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.59■■■□□ 2.81
LEMD3Q9Y2U8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.59■■■□□ 2.81
LEMD3Q9Y2U8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC32.58■■■□□ 2.81
LEMD3Q9Y2U8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
LEMD3Q9Y2U8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
LEMD3Q9Y2U8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.57■■■□□ 2.8
LEMD3Q9Y2U8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC32.56■■■□□ 2.8
LEMD3Q9Y2U8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
LEMD3Q9Y2U8 AC016575.1-201ENST00000607026 382 ntBASIC32.55■■■□□ 2.8
LEMD3Q9Y2U8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC32.54■■■□□ 2.8
LEMD3Q9Y2U8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
LEMD3Q9Y2U8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
LEMD3Q9Y2U8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC32.52■■■□□ 2.8
LEMD3Q9Y2U8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
LEMD3Q9Y2U8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms