Protein–RNA interactions for Protein: Q8VIG3

Rsph1, Radial spoke head 1 homolog, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph1Q8VIG3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Rsph1Q8VIG3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.47■■□□□ 1.83
Rsph1Q8VIG3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Rsph1Q8VIG3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.45■■□□□ 1.83
Rsph1Q8VIG3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.43■■□□□ 1.82
Rsph1Q8VIG3 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.42■■□□□ 1.82
Rsph1Q8VIG3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Rsph1Q8VIG3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rsph1Q8VIG3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
Rsph1Q8VIG3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rsph1Q8VIG3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rsph1Q8VIG3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.39■■□□□ 1.82
Rsph1Q8VIG3 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.39■■□□□ 1.82
Rsph1Q8VIG3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rsph1Q8VIG3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Rsph1Q8VIG3 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.37■■□□□ 1.81
Rsph1Q8VIG3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rsph1Q8VIG3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Rsph1Q8VIG3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rsph1Q8VIG3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Rsph1Q8VIG3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rsph1Q8VIG3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rsph1Q8VIG3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.32■■□□□ 1.8
Rsph1Q8VIG3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Rsph1Q8VIG3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rsph1Q8VIG3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rsph1Q8VIG3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rsph1Q8VIG3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rsph1Q8VIG3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Rsph1Q8VIG3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Rsph1Q8VIG3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rsph1Q8VIG3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.29■■□□□ 1.8
Rsph1Q8VIG3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
Rsph1Q8VIG3 Nkain2-201ENSMUST00000092602 558 ntBASIC26.29■■□□□ 1.8
Rsph1Q8VIG3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rsph1Q8VIG3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rsph1Q8VIG3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rsph1Q8VIG3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rsph1Q8VIG3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rsph1Q8VIG3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rsph1Q8VIG3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rsph1Q8VIG3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.24■■□□□ 1.79
Rsph1Q8VIG3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Rsph1Q8VIG3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rsph1Q8VIG3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.22■■□□□ 1.79
Rsph1Q8VIG3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Rsph1Q8VIG3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rsph1Q8VIG3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rsph1Q8VIG3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rsph1Q8VIG3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.19■■□□□ 1.78
Rsph1Q8VIG3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rsph1Q8VIG3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Rsph1Q8VIG3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rsph1Q8VIG3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.17■■□□□ 1.78
Rsph1Q8VIG3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Rsph1Q8VIG3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.16■■□□□ 1.78
Rsph1Q8VIG3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rsph1Q8VIG3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.16■■□□□ 1.78
Rsph1Q8VIG3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rsph1Q8VIG3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Rsph1Q8VIG3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rsph1Q8VIG3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Rsph1Q8VIG3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
Rsph1Q8VIG3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rsph1Q8VIG3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rsph1Q8VIG3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Rsph1Q8VIG3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rsph1Q8VIG3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rsph1Q8VIG3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.09■■□□□ 1.77
Rsph1Q8VIG3 Gm7432-201ENSMUST00000210343 879 ntBASIC26.08■■□□□ 1.77
Rsph1Q8VIG3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Rsph1Q8VIG3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rsph1Q8VIG3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.05■■□□□ 1.76
Rsph1Q8VIG3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rsph1Q8VIG3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rsph1Q8VIG3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rsph1Q8VIG3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rsph1Q8VIG3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rsph1Q8VIG3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rsph1Q8VIG3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rsph1Q8VIG3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rsph1Q8VIG3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rsph1Q8VIG3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.01■■□□□ 1.75
Rsph1Q8VIG3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rsph1Q8VIG3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rsph1Q8VIG3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rsph1Q8VIG3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Rsph1Q8VIG3 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.96■■□□□ 1.75
Rsph1Q8VIG3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.94■■□□□ 1.74
Rsph1Q8VIG3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.93■■□□□ 1.74
Rsph1Q8VIG3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rsph1Q8VIG3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rsph1Q8VIG3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Rsph1Q8VIG3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
Rsph1Q8VIG3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Rsph1Q8VIG3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rsph1Q8VIG3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rsph1Q8VIG3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.91■■□□□ 1.74
Rsph1Q8VIG3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Rsph1Q8VIG3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms