Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC33.76■■■□□ 2.99
SH3TC1Q8TE82 DUX4L29-201ENST00000425409 679 ntBASIC33.75■■■□□ 2.99
SH3TC1Q8TE82 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
SH3TC1Q8TE82 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
SH3TC1Q8TE82 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
SH3TC1Q8TE82 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
SH3TC1Q8TE82 MBP-237ENST00000579129 1052 ntTSL 5 BASIC33.71■■■□□ 2.99
SH3TC1Q8TE82 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
SH3TC1Q8TE82 HLA-V-202ENST00000446817 847 ntBASIC33.7■■■□□ 2.99
SH3TC1Q8TE82 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
SH3TC1Q8TE82 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC33.7■■■□□ 2.98
SH3TC1Q8TE82 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC33.68■■■□□ 2.98
SH3TC1Q8TE82 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
SH3TC1Q8TE82 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
SH3TC1Q8TE82 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
SH3TC1Q8TE82 AC108673.1-201ENST00000510422 1159 ntBASIC33.67■■■□□ 2.98
SH3TC1Q8TE82 AC021231.2-201ENST00000594613 730 ntBASIC33.67■■■□□ 2.98
SH3TC1Q8TE82 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC33.67■■■□□ 2.98
SH3TC1Q8TE82 CIB2-204ENST00000557846 934 ntTSL 3 BASIC33.66■■■□□ 2.98
SH3TC1Q8TE82 MIR6090-201ENST00000622481 60 ntBASIC33.66■■■□□ 2.98
SH3TC1Q8TE82 AC120057.4-201ENST00000624722 1615 ntBASIC33.64■■■□□ 2.98
SH3TC1Q8TE82 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
SH3TC1Q8TE82 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
SH3TC1Q8TE82 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
SH3TC1Q8TE82 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
SH3TC1Q8TE82 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
SH3TC1Q8TE82 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
SH3TC1Q8TE82 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC33.61■■■□□ 2.97
SH3TC1Q8TE82 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC33.61■■■□□ 2.97
SH3TC1Q8TE82 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC33.6■■■□□ 2.97
SH3TC1Q8TE82 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC33.59■■■□□ 2.97
SH3TC1Q8TE82 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
SH3TC1Q8TE82 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
SH3TC1Q8TE82 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC33.58■■■□□ 2.97
SH3TC1Q8TE82 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
SH3TC1Q8TE82 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC33.57■■■□□ 2.97
SH3TC1Q8TE82 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC33.57■■■□□ 2.97
SH3TC1Q8TE82 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC33.57■■■□□ 2.97
SH3TC1Q8TE82 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC33.56■■■□□ 2.96
SH3TC1Q8TE82 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
SH3TC1Q8TE82 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC33.56■■■□□ 2.96
SH3TC1Q8TE82 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC33.56■■■□□ 2.96
SH3TC1Q8TE82 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
SH3TC1Q8TE82 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC33.55■■■□□ 2.96
SH3TC1Q8TE82 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC33.54■■■□□ 2.96
SH3TC1Q8TE82 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC33.54■■■□□ 2.96
SH3TC1Q8TE82 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC33.53■■■□□ 2.96
SH3TC1Q8TE82 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC33.53■■■□□ 2.96
SH3TC1Q8TE82 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
SH3TC1Q8TE82 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
SH3TC1Q8TE82 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC33.51■■■□□ 2.95
SH3TC1Q8TE82 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC33.51■■■□□ 2.95
SH3TC1Q8TE82 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC33.51■■■□□ 2.95
SH3TC1Q8TE82 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC33.48■■■□□ 2.95
SH3TC1Q8TE82 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC33.48■■■□□ 2.95
SH3TC1Q8TE82 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
SH3TC1Q8TE82 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
SH3TC1Q8TE82 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC33.46■■■□□ 2.95
SH3TC1Q8TE82 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC33.45■■■□□ 2.95
SH3TC1Q8TE82 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
SH3TC1Q8TE82 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
SH3TC1Q8TE82 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
SH3TC1Q8TE82 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
SH3TC1Q8TE82 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
SH3TC1Q8TE82 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC33.42■■■□□ 2.94
SH3TC1Q8TE82 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC33.41■■■□□ 2.94
SH3TC1Q8TE82 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC33.41■■■□□ 2.94
SH3TC1Q8TE82 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC33.4■■■□□ 2.94
SH3TC1Q8TE82 MACF1-219ENST00000484793 834 ntTSL 2 BASIC33.4■■■□□ 2.94
SH3TC1Q8TE82 RPS2-202ENST00000526522 924 ntTSL 2 BASIC33.4■■■□□ 2.94
SH3TC1Q8TE82 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
SH3TC1Q8TE82 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC33.37■■■□□ 2.93
SH3TC1Q8TE82 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
SH3TC1Q8TE82 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
SH3TC1Q8TE82 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC33.35■■■□□ 2.93
SH3TC1Q8TE82 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
SH3TC1Q8TE82 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
SH3TC1Q8TE82 RNF166-209ENST00000567844 633 ntTSL 5 BASIC33.33■■■□□ 2.93
SH3TC1Q8TE82 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC33.32■■■□□ 2.93
SH3TC1Q8TE82 LINC01971-201ENST00000617888 1048 ntBASIC33.31■■■□□ 2.92
SH3TC1Q8TE82 MIR639-201ENST00000384974 98 ntBASIC33.29■■■□□ 2.92
SH3TC1Q8TE82 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC33.29■■■□□ 2.92
SH3TC1Q8TE82 DUX4L11-201ENST00000611504 1267 ntBASIC33.28■■■□□ 2.92
SH3TC1Q8TE82 DUX4L12-201ENST00000614593 1267 ntBASIC33.28■■■□□ 2.92
SH3TC1Q8TE82 DUX4L14-201ENST00000621227 1267 ntBASIC33.28■■■□□ 2.92
SH3TC1Q8TE82 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
SH3TC1Q8TE82 MIR3648-2-201ENST00000581792 180 ntBASIC33.28■■■□□ 2.92
SH3TC1Q8TE82 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC33.28■■■□□ 2.92
SH3TC1Q8TE82 MIR3648-1-201ENST00000615959 180 ntBASIC33.28■■■□□ 2.92
SH3TC1Q8TE82 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC33.27■■■□□ 2.92
SH3TC1Q8TE82 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
SH3TC1Q8TE82 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC33.27■■■□□ 2.92
SH3TC1Q8TE82 MIR4449-201ENST00000578365 66 ntBASIC33.27■■■□□ 2.92
SH3TC1Q8TE82 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC33.26■■■□□ 2.92
SH3TC1Q8TE82 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC33.26■■■□□ 2.91
SH3TC1Q8TE82 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC33.26■■■□□ 2.91
SH3TC1Q8TE82 GDI1-215ENST00000630693 786 ntTSL 4 BASIC33.26■■■□□ 2.91
SH3TC1Q8TE82 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
SH3TC1Q8TE82 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
SH3TC1Q8TE82 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms