Protein–RNA interactions for Protein: Q8R280

Vmn1r199, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r199Q8R280 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29,13■■■□□ 2,25
Vmn1r199Q8R280 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC29,12■■■□□ 2,25
Vmn1r199Q8R280 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29,11■■■□□ 2,25
Vmn1r199Q8R280 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29,11■■■□□ 2,25
Vmn1r199Q8R280 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29,1■■■□□ 2,25
Vmn1r199Q8R280 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29,09■■■□□ 2,25
Vmn1r199Q8R280 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29,09■■■□□ 2,25
Vmn1r199Q8R280 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29,09■■■□□ 2,25
Vmn1r199Q8R280 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29,07■■■□□ 2,24
Vmn1r199Q8R280 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29,06■■■□□ 2,24
Vmn1r199Q8R280 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29,05■■■□□ 2,24
Vmn1r199Q8R280 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29,04■■■□□ 2,24
Vmn1r199Q8R280 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29,04■■■□□ 2,24
Vmn1r199Q8R280 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29,04■■■□□ 2,24
Vmn1r199Q8R280 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29,04■■■□□ 2,24
Vmn1r199Q8R280 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29,04■■■□□ 2,24
Vmn1r199Q8R280 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29,03■■■□□ 2,24
Vmn1r199Q8R280 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29,03■■■□□ 2,24
Vmn1r199Q8R280 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29,03■■■□□ 2,24
Vmn1r199Q8R280 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29,03■■■□□ 2,24
Vmn1r199Q8R280 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29,01■■■□□ 2,23
Vmn1r199Q8R280 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29,01■■■□□ 2,23
Vmn1r199Q8R280 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2,23
Vmn1r199Q8R280 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2,23
Vmn1r199Q8R280 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2,23
Vmn1r199Q8R280 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28,98■■■□□ 2,23
Vmn1r199Q8R280 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28,97■■■□□ 2,23
Vmn1r199Q8R280 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28,97■■■□□ 2,23
Vmn1r199Q8R280 Gm7432-201ENSMUST00000210343 879 ntBASIC28,95■■■□□ 2,22
Vmn1r199Q8R280 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,95■■■□□ 2,22
Vmn1r199Q8R280 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28,94■■■□□ 2,22
Vmn1r199Q8R280 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28,94■■■□□ 2,22
Vmn1r199Q8R280 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28,93■■■□□ 2,22
Vmn1r199Q8R280 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28,92■■■□□ 2,22
Vmn1r199Q8R280 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28,92■■■□□ 2,22
Vmn1r199Q8R280 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28,92■■■□□ 2,22
Vmn1r199Q8R280 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28,91■■■□□ 2,22
Vmn1r199Q8R280 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28,91■■■□□ 2,22
Vmn1r199Q8R280 Gm30346-201ENSMUST00000218641 1699 ntBASIC28,9■■■□□ 2,22
Vmn1r199Q8R280 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28,87■■■□□ 2,21
Vmn1r199Q8R280 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28,87■■■□□ 2,21
Vmn1r199Q8R280 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28,87■■■□□ 2,21
Vmn1r199Q8R280 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28,87■■■□□ 2,21
Vmn1r199Q8R280 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28,83■■■□□ 2,21
Vmn1r199Q8R280 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28,82■■■□□ 2,2
Vmn1r199Q8R280 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28,81■■■□□ 2,2
Vmn1r199Q8R280 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28,81■■■□□ 2,2
Vmn1r199Q8R280 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28,8■■■□□ 2,2
Vmn1r199Q8R280 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28,79■■■□□ 2,2
Vmn1r199Q8R280 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28,79■■■□□ 2,2
Vmn1r199Q8R280 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28,79■■■□□ 2,2
Vmn1r199Q8R280 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28,78■■■□□ 2,2
Vmn1r199Q8R280 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28,78■■■□□ 2,2
Vmn1r199Q8R280 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28,77■■■□□ 2,2
Vmn1r199Q8R280 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28,77■■■□□ 2,2
Vmn1r199Q8R280 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28,76■■■□□ 2,19
Vmn1r199Q8R280 Gm2415-204ENSMUST00000190235 2004 ntBASIC28,74■■■□□ 2,19
Vmn1r199Q8R280 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28,74■■■□□ 2,19
Vmn1r199Q8R280 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28,73■■■□□ 2,19
Vmn1r199Q8R280 Gm11599-201ENSMUST00000118720 878 ntBASIC28,73■■■□□ 2,19
Vmn1r199Q8R280 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28,73■■■□□ 2,19
Vmn1r199Q8R280 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28,72■■■□□ 2,19
Vmn1r199Q8R280 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28,72■■■□□ 2,19
Vmn1r199Q8R280 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28,71■■■□□ 2,19
Vmn1r199Q8R280 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28,71■■■□□ 2,19
Vmn1r199Q8R280 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28,7■■■□□ 2,19
Vmn1r199Q8R280 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28,7■■■□□ 2,18
Vmn1r199Q8R280 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28,69■■■□□ 2,18
Vmn1r199Q8R280 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28,69■■■□□ 2,18
Vmn1r199Q8R280 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28,68■■■□□ 2,18
Vmn1r199Q8R280 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28,68■■■□□ 2,18
Vmn1r199Q8R280 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28,68■■■□□ 2,18
Vmn1r199Q8R280 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28,68■■■□□ 2,18
Vmn1r199Q8R280 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Vmn1r199Q8R280 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28,64■■■□□ 2,18
Vmn1r199Q8R280 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28,64■■■□□ 2,18
Vmn1r199Q8R280 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28,63■■■□□ 2,17
Vmn1r199Q8R280 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28,63■■■□□ 2,17
Vmn1r199Q8R280 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28,61■■■□□ 2,17
Vmn1r199Q8R280 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28,6■■■□□ 2,17
Vmn1r199Q8R280 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28,59■■■□□ 2,17
Vmn1r199Q8R280 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28,58■■■□□ 2,17
Vmn1r199Q8R280 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28,57■■■□□ 2,16
Vmn1r199Q8R280 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28,56■■■□□ 2,16
Vmn1r199Q8R280 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28,55■■■□□ 2,16
Vmn1r199Q8R280 Gm6658-202ENSMUST00000209493 1885 ntBASIC28,55■■■□□ 2,16
Vmn1r199Q8R280 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28,53■■■□□ 2,16
Vmn1r199Q8R280 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28,51■■■□□ 2,15
Vmn1r199Q8R280 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28,51■■■□□ 2,15
Vmn1r199Q8R280 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28,5■■■□□ 2,15
Vmn1r199Q8R280 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28,49■■■□□ 2,15
Vmn1r199Q8R280 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28,49■■■□□ 2,15
Vmn1r199Q8R280 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28,49■■■□□ 2,15
Vmn1r199Q8R280 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28,48■■■□□ 2,15
Vmn1r199Q8R280 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
Vmn1r199Q8R280 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28,48■■■□□ 2,15
Vmn1r199Q8R280 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28,47■■■□□ 2,15
Vmn1r199Q8R280 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28,47■■■□□ 2,15
Vmn1r199Q8R280 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28,47■■■□□ 2,15
Vmn1r199Q8R280 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28,47■■■□□ 2,15
Retrieved 100 of 76,532 protein–RNA pairs in 23,4 ms