Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cspg5Q71M36 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.46■■□□□ 1.67
Cspg5Q71M36 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cspg5Q71M36 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cspg5Q71M36 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cspg5Q71M36 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.43■■□□□ 1.66
Cspg5Q71M36 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.43■■□□□ 1.66
Cspg5Q71M36 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.42■■□□□ 1.66
Cspg5Q71M36 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
Cspg5Q71M36 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.4■■□□□ 1.66
Cspg5Q71M36 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cspg5Q71M36 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cspg5Q71M36 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.39■■□□□ 1.65
Cspg5Q71M36 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.38■■□□□ 1.65
Cspg5Q71M36 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cspg5Q71M36 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.38■■□□□ 1.65
Cspg5Q71M36 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cspg5Q71M36 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cspg5Q71M36 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Cspg5Q71M36 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Cspg5Q71M36 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cspg5Q71M36 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cspg5Q71M36 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cspg5Q71M36 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Cspg5Q71M36 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Cspg5Q71M36 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.34■■□□□ 1.65
Cspg5Q71M36 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cspg5Q71M36 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Cspg5Q71M36 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cspg5Q71M36 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
Cspg5Q71M36 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cspg5Q71M36 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cspg5Q71M36 Nkain2-201ENSMUST00000092602 558 ntBASIC25.33■■□□□ 1.65
Cspg5Q71M36 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cspg5Q71M36 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Cspg5Q71M36 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cspg5Q71M36 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.31■■□□□ 1.64
Cspg5Q71M36 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.31■■□□□ 1.64
Cspg5Q71M36 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cspg5Q71M36 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cspg5Q71M36 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Cspg5Q71M36 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Cspg5Q71M36 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.29■■□□□ 1.64
Cspg5Q71M36 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.29■■□□□ 1.64
Cspg5Q71M36 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Cspg5Q71M36 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Cspg5Q71M36 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Cspg5Q71M36 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cspg5Q71M36 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cspg5Q71M36 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cspg5Q71M36 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cspg5Q71M36 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Cspg5Q71M36 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Cspg5Q71M36 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Cspg5Q71M36 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Cspg5Q71M36 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Cspg5Q71M36 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cspg5Q71M36 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Cspg5Q71M36 Zxda-201ENSMUST00000117281 2621 ntBASIC25.21■■□□□ 1.63
Cspg5Q71M36 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cspg5Q71M36 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cspg5Q71M36 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cspg5Q71M36 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Cspg5Q71M36 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cspg5Q71M36 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.18■■□□□ 1.62
Cspg5Q71M36 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.17■■□□□ 1.62
Cspg5Q71M36 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cspg5Q71M36 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cspg5Q71M36 Gm7432-201ENSMUST00000210343 879 ntBASIC25.14■■□□□ 1.62
Cspg5Q71M36 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.13■■□□□ 1.61
Cspg5Q71M36 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Cspg5Q71M36 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cspg5Q71M36 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.11■■□□□ 1.61
Cspg5Q71M36 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cspg5Q71M36 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Cspg5Q71M36 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
Cspg5Q71M36 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.09■■□□□ 1.61
Cspg5Q71M36 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cspg5Q71M36 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Cspg5Q71M36 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Cspg5Q71M36 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cspg5Q71M36 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Cspg5Q71M36 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cspg5Q71M36 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cspg5Q71M36 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Cspg5Q71M36 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Cspg5Q71M36 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cspg5Q71M36 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Cspg5Q71M36 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Cspg5Q71M36 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Cspg5Q71M36 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Cspg5Q71M36 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25■■□□□ 1.59
Cspg5Q71M36 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Cspg5Q71M36 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Cspg5Q71M36 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Cspg5Q71M36 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
Cspg5Q71M36 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.99■■□□□ 1.59
Cspg5Q71M36 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.98■■□□□ 1.59
Cspg5Q71M36 Gm11599-201ENSMUST00000118720 878 ntBASIC24.98■■□□□ 1.59
Cspg5Q71M36 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms