Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Nup188Q6ZQH8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Nup188Q6ZQH8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.79■■■□□ 2.52
Nup188Q6ZQH8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
Nup188Q6ZQH8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Nup188Q6ZQH8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Nup188Q6ZQH8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Nup188Q6ZQH8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Nup188Q6ZQH8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.77■■■□□ 2.52
Nup188Q6ZQH8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Nup188Q6ZQH8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Nup188Q6ZQH8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Nup188Q6ZQH8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.74■■■□□ 2.51
Nup188Q6ZQH8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Nup188Q6ZQH8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Nup188Q6ZQH8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Nup188Q6ZQH8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.71■■■□□ 2.51
Nup188Q6ZQH8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
Nup188Q6ZQH8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.71■■■□□ 2.51
Nup188Q6ZQH8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
Nup188Q6ZQH8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Nup188Q6ZQH8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Nup188Q6ZQH8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Nup188Q6ZQH8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Nup188Q6ZQH8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Nup188Q6ZQH8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.68■■■□□ 2.5
Nup188Q6ZQH8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Nup188Q6ZQH8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
Nup188Q6ZQH8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Nup188Q6ZQH8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Nup188Q6ZQH8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Nup188Q6ZQH8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Nup188Q6ZQH8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
Nup188Q6ZQH8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Nup188Q6ZQH8 Nkain2-201ENSMUST00000092602 558 ntBASIC30.63■■■□□ 2.49
Nup188Q6ZQH8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.62■■■□□ 2.49
Nup188Q6ZQH8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Nup188Q6ZQH8 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.6■■■□□ 2.49
Nup188Q6ZQH8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Nup188Q6ZQH8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Nup188Q6ZQH8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.56■■■□□ 2.48
Nup188Q6ZQH8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Nup188Q6ZQH8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
Nup188Q6ZQH8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Nup188Q6ZQH8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
Nup188Q6ZQH8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Nup188Q6ZQH8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Nup188Q6ZQH8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Nup188Q6ZQH8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Nup188Q6ZQH8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Nup188Q6ZQH8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Nup188Q6ZQH8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Nup188Q6ZQH8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Nup188Q6ZQH8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Nup188Q6ZQH8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.47■■■□□ 2.47
Nup188Q6ZQH8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.46■■■□□ 2.47
Nup188Q6ZQH8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.45■■■□□ 2.46
Nup188Q6ZQH8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Nup188Q6ZQH8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Nup188Q6ZQH8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Nup188Q6ZQH8 Gm7432-201ENSMUST00000210343 879 ntBASIC30.41■■■□□ 2.46
Nup188Q6ZQH8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.41■■■□□ 2.46
Nup188Q6ZQH8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
Nup188Q6ZQH8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Nup188Q6ZQH8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.39■■■□□ 2.46
Nup188Q6ZQH8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Nup188Q6ZQH8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.36■■■□□ 2.45
Nup188Q6ZQH8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Nup188Q6ZQH8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Nup188Q6ZQH8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Nup188Q6ZQH8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
Nup188Q6ZQH8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Nup188Q6ZQH8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Nup188Q6ZQH8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Nup188Q6ZQH8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Nup188Q6ZQH8 Gm11599-201ENSMUST00000118720 878 ntBASIC30.32■■■□□ 2.44
Nup188Q6ZQH8 Mir6538-201ENSMUST00000183713 110 ntBASIC30.32■■■□□ 2.44
Nup188Q6ZQH8 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.31■■■□□ 2.44
Nup188Q6ZQH8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30.3■■■□□ 2.44
Nup188Q6ZQH8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Nup188Q6ZQH8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Nup188Q6ZQH8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.29■■■□□ 2.44
Nup188Q6ZQH8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Nup188Q6ZQH8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Nup188Q6ZQH8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.28■■■□□ 2.44
Nup188Q6ZQH8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Nup188Q6ZQH8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Nup188Q6ZQH8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.26■■■□□ 2.44
Nup188Q6ZQH8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Nup188Q6ZQH8 Gm11175-201ENSMUST00000116172 543 ntBASIC30.25■■■□□ 2.43
Nup188Q6ZQH8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30.25■■■□□ 2.43
Nup188Q6ZQH8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Nup188Q6ZQH8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC30.24■■■□□ 2.43
Nup188Q6ZQH8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Nup188Q6ZQH8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Nup188Q6ZQH8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Nup188Q6ZQH8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.21■■■□□ 2.43
Nup188Q6ZQH8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Nup188Q6ZQH8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Nup188Q6ZQH8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms