Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Best3Q6H1V1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Best3Q6H1V1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Best3Q6H1V1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
Best3Q6H1V1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Best3Q6H1V1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Best3Q6H1V1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.57■■■□□ 2.48
Best3Q6H1V1 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.56■■■□□ 2.48
Best3Q6H1V1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Best3Q6H1V1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Best3Q6H1V1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Best3Q6H1V1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Best3Q6H1V1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Best3Q6H1V1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Best3Q6H1V1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Best3Q6H1V1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Best3Q6H1V1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Best3Q6H1V1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.49■■■□□ 2.47
Best3Q6H1V1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.49■■■□□ 2.47
Best3Q6H1V1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.49■■■□□ 2.47
Best3Q6H1V1 Nkain2-201ENSMUST00000092602 558 ntBASIC30.49■■■□□ 2.47
Best3Q6H1V1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Best3Q6H1V1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Best3Q6H1V1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Best3Q6H1V1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
Best3Q6H1V1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
Best3Q6H1V1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Best3Q6H1V1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.44■■■□□ 2.46
Best3Q6H1V1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
Best3Q6H1V1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Best3Q6H1V1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.43■■■□□ 2.46
Best3Q6H1V1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Best3Q6H1V1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Best3Q6H1V1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Best3Q6H1V1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Best3Q6H1V1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.38■■■□□ 2.45
Best3Q6H1V1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Best3Q6H1V1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Best3Q6H1V1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Best3Q6H1V1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Best3Q6H1V1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Best3Q6H1V1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Best3Q6H1V1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Best3Q6H1V1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Best3Q6H1V1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Best3Q6H1V1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Best3Q6H1V1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Best3Q6H1V1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
Best3Q6H1V1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Best3Q6H1V1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.3■■■□□ 2.44
Best3Q6H1V1 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.29■■■□□ 2.44
Best3Q6H1V1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Best3Q6H1V1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.27■■■□□ 2.44
Best3Q6H1V1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Best3Q6H1V1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Best3Q6H1V1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Best3Q6H1V1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Best3Q6H1V1 Gm7432-201ENSMUST00000210343 879 ntBASIC30.23■■■□□ 2.43
Best3Q6H1V1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.23■■■□□ 2.43
Best3Q6H1V1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Best3Q6H1V1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.22■■■□□ 2.43
Best3Q6H1V1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Best3Q6H1V1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.21■■■□□ 2.43
Best3Q6H1V1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Best3Q6H1V1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Best3Q6H1V1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Best3Q6H1V1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
Best3Q6H1V1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Best3Q6H1V1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Best3Q6H1V1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Best3Q6H1V1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Best3Q6H1V1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Best3Q6H1V1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.12■■■□□ 2.41
Best3Q6H1V1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.12■■■□□ 2.41
Best3Q6H1V1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Best3Q6H1V1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Best3Q6H1V1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Best3Q6H1V1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Best3Q6H1V1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
Best3Q6H1V1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
Best3Q6H1V1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.06■■■□□ 2.4
Best3Q6H1V1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
Best3Q6H1V1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Best3Q6H1V1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Best3Q6H1V1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Best3Q6H1V1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Best3Q6H1V1 Gm11599-201ENSMUST00000118720 878 ntBASIC30.01■■■□□ 2.39
Best3Q6H1V1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
Best3Q6H1V1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30■■■□□ 2.39
Best3Q6H1V1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Best3Q6H1V1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Best3Q6H1V1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
Best3Q6H1V1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Best3Q6H1V1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC29.97■■■□□ 2.39
Best3Q6H1V1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Best3Q6H1V1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.95■■■□□ 2.39
Best3Q6H1V1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29.95■■■□□ 2.39
Best3Q6H1V1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29.95■■■□□ 2.39
Best3Q6H1V1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Best3Q6H1V1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29.92■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms