Protein–RNA interactions for Protein: Q07953

SDO1, Ribosome maturation protein SDO1, yeastyeast

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDO1Q07953 MRS6YOR370C 1812 nt7.85□□□□□ -1.15
SDO1Q07953 YDL086WYDL086W 822 nt7.85□□□□□ -1.15
SDO1Q07953 YFL066CYFL066C 1179 nt7.85□□□□□ -1.15
SDO1Q07953 SHB17YKR043C 816 nt7.85□□□□□ -1.15
SDO1Q07953 GND2YGR256W 1479 nt7.85□□□□□ -1.15
SDO1Q07953 YKL133CYKL133C 1392 nt7.84□□□□□ -1.15
SDO1Q07953 ACH1YBL015W 1581 nt7.84□□□□□ -1.15
SDO1Q07953 FMS1YMR020W 1527 nt7.84□□□□□ -1.15
SDO1Q07953 MTO1YGL236C 2010 nt7.84□□□□□ -1.15
SDO1Q07953 SSL2YIL143C 2532 nt7.83□□□□□ -1.16
SDO1Q07953 MEP3YPR138C 1470 nt7.83□□□□□ -1.16
SDO1Q07953 SFL1YOR140W 2301 nt7.83□□□□□ -1.16
SDO1Q07953 HXT10YFL011W 1641 nt7.83□□□□□ -1.16
SDO1Q07953 SBA1YKL117W 651 nt7.83□□□□□ -1.16
SDO1Q07953 ALR1YOL130W 2580 nt7.82□□□□□ -1.16
SDO1Q07953 MDM35YKL053C-A 261 nt7.82□□□□□ -1.16
SDO1Q07953 SFA1YDL168W 1161 nt7.81□□□□□ -1.16
SDO1Q07953 SAM2YDR502C 1155 nt7.81□□□□□ -1.16
SDO1Q07953 TRT2tT(CGU)K 72 nt7.81□□□□□ -1.16
SDO1Q07953 PHO23YNL097C 993 nt7.81□□□□□ -1.16
SDO1Q07953 TPN1YGL186C 1740 nt7.81□□□□□ -1.16
SDO1Q07953 YDR010CYDR010C 333 nt7.8□□□□□ -1.16
SDO1Q07953 YPL251WYPL251W 303 nt7.8□□□□□ -1.16
SDO1Q07953 TIF6YPR016C 738 nt7.8□□□□□ -1.16
SDO1Q07953 PAU7YAR020C 168 nt7.79□□□□□ -1.16
SDO1Q07953 PRE6YOL038W 765 nt7.79□□□□□ -1.16
SDO1Q07953 PEX2YJL210W 816 nt7.78□□□□□ -1.16
SDO1Q07953 MEX67YPL169C 1800 nt7.78□□□□□ -1.16
SDO1Q07953 MTG2YHR168W 1557 nt7.77□□□□□ -1.17
SDO1Q07953 LSR1LSR1 1175 nt7.76□□□□□ -1.17
SDO1Q07953 DUR3YHL016C 2208 nt7.76□□□□□ -1.17
SDO1Q07953 YPS3YLR121C 1527 nt7.76□□□□□ -1.17
SDO1Q07953 FLR1YBR008C 1647 nt7.75□□□□□ -1.17
SDO1Q07953 AKR2YOR034C 2250 nt7.75□□□□□ -1.17
SDO1Q07953 RTG2YGL252C 1767 nt7.74□□□□□ -1.17
SDO1Q07953 TIM44YIL022W 1296 nt7.74□□□□□ -1.17
SDO1Q07953 YHR219WYHR219W 1875 nt7.73□□□□□ -1.17
SDO1Q07953 YFR018CYFR018C 1092 nt7.73□□□□□ -1.17
SDO1Q07953 YMR103CYMR103C 363 nt7.73□□□□□ -1.17
SDO1Q07953 YDR306CYDR306C 1437 nt7.72□□□□□ -1.17
SDO1Q07953 MRPL8YJL063C 717 nt7.72□□□□□ -1.17
SDO1Q07953 NBA1YOL070C 1506 nt7.72□□□□□ -1.17
SDO1Q07953 DLD2YDL178W 1593 nt7.71□□□□□ -1.18
SDO1Q07953 CWP2YKL096W-A 279 nt7.7□□□□□ -1.18
SDO1Q07953 HIP1YGR191W 1812 nt7.69□□□□□ -1.18
SDO1Q07953 MET28YIR017C 564 nt7.69□□□□□ -1.18
SDO1Q07953 ADO1YJR105W 1023 nt7.69□□□□□ -1.18
SDO1Q07953 THI6YPL214C 1623 nt7.69□□□□□ -1.18
SDO1Q07953 AGP3YFL055W 1677 nt7.69□□□□□ -1.18
SDO1Q07953 ALP1YNL270C 1722 nt7.68□□□□□ -1.18
SDO1Q07953 MDL2YPL270W 2322 nt7.67□□□□□ -1.18
SDO1Q07953 YRF1-2YER190W 5046 nt7.67□□□□□ -1.18
SDO1Q07953 RPD3YNL330C 1302 nt7.67□□□□□ -1.18
SDO1Q07953 GCD11YER025W 1584 nt7.66□□□□□ -1.18
SDO1Q07953 SNU66YOR308C 1764 nt7.66□□□□□ -1.18
SDO1Q07953 UTH1YKR042W 1098 nt7.65□□□□□ -1.18
SDO1Q07953 SEC61YLR378C 1443 nt7.65□□□□□ -1.18
SDO1Q07953 AIM1YAL046C 357 nt7.64□□□□□ -1.19
SDO1Q07953 YLR046CYLR046C 813 nt7.64□□□□□ -1.19
SDO1Q07953 YMR262WYMR262W 942 nt7.64□□□□□ -1.19
SDO1Q07953 HEM13YDR044W 987 nt7.63□□□□□ -1.19
SDO1Q07953 MIR1YJR077C 936 nt7.63□□□□□ -1.19
SDO1Q07953 MIM1YOL026C 342 nt7.63□□□□□ -1.19
SDO1Q07953 DLD3YEL071W 1491 nt7.62□□□□□ -1.19
SDO1Q07953 MSF1YPR047W 1410 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)BtD(GUC)B 72 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)DtD(GUC)D 72 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)G1tD(GUC)G1 72 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)G2tD(GUC)G2 72 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)I1tD(GUC)I1 72 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)I2tD(GUC)I2 72 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)J1tD(GUC)J1 72 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)J2tD(GUC)J2 72 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)J3tD(GUC)J3 72 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)J4tD(GUC)J4 72 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)KtD(GUC)K 72 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)L1tD(GUC)L1 72 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)L2tD(GUC)L2 72 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)MtD(GUC)M 72 nt7.62□□□□□ -1.19
SDO1Q07953 tD(GUC)OtD(GUC)O 72 nt7.62□□□□□ -1.19
SDO1Q07953 ADE2YOR128C 1716 nt7.61□□□□□ -1.19
SDO1Q07953 OXA1YER154W 1209 nt7.6□□□□□ -1.19
SDO1Q07953 PHO89YBR296C 1725 nt7.6□□□□□ -1.19
SDO1Q07953 UBA4YHR111W 1323 nt7.59□□□□□ -1.19
SDO1Q07953 ADE5,7YGL234W 2409 nt7.59□□□□□ -1.19
SDO1Q07953 INH1YDL181W 258 nt7.59□□□□□ -1.19
SDO1Q07953 COQ2YNR041C 1119 nt7.59□□□□□ -1.19
SDO1Q07953 FIT3YOR383C 615 nt7.58□□□□□ -1.2
SDO1Q07953 TIP1YBR067C 633 nt7.58□□□□□ -1.2
SDO1Q07953 YER188WYER188W 720 nt7.57□□□□□ -1.2
SDO1Q07953 LSB5YCL034W 1065 nt7.57□□□□□ -1.2
SDO1Q07953 MAM3YOL060C 2121 nt7.57□□□□□ -1.2
SDO1Q07953 OSH7YHR001W 1314 nt7.56□□□□□ -1.2
SDO1Q07953 ENT4YLL038C 744 nt7.56□□□□□ -1.2
SDO1Q07953 UFD1YGR048W 1086 nt7.55□□□□□ -1.2
SDO1Q07953 RBG1YAL036C 1110 nt7.55□□□□□ -1.2
SDO1Q07953 RPC31YNL151C 756 nt7.55□□□□□ -1.2
SDO1Q07953 RIM2YBR192W 1134 nt7.55□□□□□ -1.2
SDO1Q07953 DAK2YFL053W 1776 nt7.55□□□□□ -1.2
SDO1Q07953 ITR2YOL103W 1830 nt7.53□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 8.8 ms