Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 DAK2YFL053W 1776 nt6.64□□□□□ -1.35
LSM6Q06406 TIM44YIL022W 1296 nt6.63□□□□□ -1.35
LSM6Q06406 BRR1YPR057W 1026 nt6.63□□□□□ -1.35
LSM6Q06406 YHR219WYHR219W 1875 nt6.62□□□□□ -1.35
LSM6Q06406 UFD1YGR048W 1086 nt6.62□□□□□ -1.35
LSM6Q06406 TRT2tT(CGU)K 72 nt6.62□□□□□ -1.35
LSM6Q06406 YPS3YLR121C 1527 nt6.61□□□□□ -1.35
LSM6Q06406 FRE6YLL051C 2139 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)BtD(GUC)B 72 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)DtD(GUC)D 72 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)G1tD(GUC)G1 72 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)G2tD(GUC)G2 72 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)I1tD(GUC)I1 72 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)I2tD(GUC)I2 72 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)J1tD(GUC)J1 72 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)J2tD(GUC)J2 72 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)J3tD(GUC)J3 72 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)J4tD(GUC)J4 72 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)KtD(GUC)K 72 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)L1tD(GUC)L1 72 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)L2tD(GUC)L2 72 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)MtD(GUC)M 72 nt6.61□□□□□ -1.35
LSM6Q06406 tD(GUC)OtD(GUC)O 72 nt6.61□□□□□ -1.35
LSM6Q06406 GND2YGR256W 1479 nt6.6□□□□□ -1.35
LSM6Q06406 YMR262WYMR262W 942 nt6.6□□□□□ -1.35
LSM6Q06406 LSB5YCL034W 1065 nt6.6□□□□□ -1.35
LSM6Q06406 FIT1YDR534C 1587 nt6.6□□□□□ -1.35
LSM6Q06406 RPD3YNL330C 1302 nt6.59□□□□□ -1.35
LSM6Q06406 SAM2YDR502C 1155 nt6.59□□□□□ -1.35
LSM6Q06406 SPP1YPL138C 1062 nt6.59□□□□□ -1.35
LSM6Q06406 HBS1YKR084C 1836 nt6.59□□□□□ -1.35
LSM6Q06406 YPL251WYPL251W 303 nt6.58□□□□□ -1.36
LSM6Q06406 LPD1YFL018C 1500 nt6.57□□□□□ -1.36
LSM6Q06406 INH1YDL181W 258 nt6.57□□□□□ -1.36
LSM6Q06406 tL(GAG)GtL(GAG)G 82 nt6.56□□□□□ -1.36
LSM6Q06406 PRE6YOL038W 765 nt6.56□□□□□ -1.36
LSM6Q06406 TOM6YOR045W 186 nt6.56□□□□□ -1.36
LSM6Q06406 FLR1YBR008C 1647 nt6.56□□□□□ -1.36
LSM6Q06406 TPN1YGL186C 1740 nt6.54□□□□□ -1.36
LSM6Q06406 MTG2YHR168W 1557 nt6.54□□□□□ -1.36
LSM6Q06406 TIF6YPR016C 738 nt6.54□□□□□ -1.36
LSM6Q06406 DLD3YEL071W 1491 nt6.53□□□□□ -1.36
LSM6Q06406 YHL019W-AYHL019W-A 594 nt6.53□□□□□ -1.36
LSM6Q06406 VPS75YNL246W 795 nt6.52□□□□□ -1.37
LSM6Q06406 RIM2YBR192W 1134 nt6.52□□□□□ -1.37
LSM6Q06406 DLD2YDL178W 1593 nt6.52□□□□□ -1.37
LSM6Q06406 KRR1YCL059C 951 nt6.51□□□□□ -1.37
LSM6Q06406 LSM5YER146W 282 nt6.51□□□□□ -1.37
LSM6Q06406 UTH1YKR042W 1098 nt6.51□□□□□ -1.37
LSM6Q06406 YLR046CYLR046C 813 nt6.51□□□□□ -1.37
LSM6Q06406 HIP1YGR191W 1812 nt6.5□□□□□ -1.37
LSM6Q06406 YNL115CYNL115C 1935 nt6.5□□□□□ -1.37
LSM6Q06406 FET5YFL041W 1869 nt6.5□□□□□ -1.37
LSM6Q06406 RPC31YNL151C 756 nt6.5□□□□□ -1.37
LSM6Q06406 TOM71YHR117W 1920 nt6.5□□□□□ -1.37
LSM6Q06406 SEC61YLR378C 1443 nt6.5□□□□□ -1.37
LSM6Q06406 DUR3YHL016C 2208 nt6.49□□□□□ -1.37
LSM6Q06406 OXA1YER154W 1209 nt6.49□□□□□ -1.37
LSM6Q06406 ENT4YLL038C 744 nt6.49□□□□□ -1.37
LSM6Q06406 AKR2YOR034C 2250 nt6.49□□□□□ -1.37
LSM6Q06406 YIL177CYIL177C 5277 nt6.49□□□□□ -1.37
LSM6Q06406 HEM14YER014W 1620 nt6.48□□□□□ -1.37
LSM6Q06406 SFA1YDL168W 1161 nt6.48□□□□□ -1.37
LSM6Q06406 YMR103CYMR103C 363 nt6.48□□□□□ -1.37
LSM6Q06406 ORT1YOR130C 879 nt6.48□□□□□ -1.37
LSM6Q06406 MSF1YPR047W 1410 nt6.48□□□□□ -1.37
LSM6Q06406 PEX2YJL210W 816 nt6.47□□□□□ -1.37
LSM6Q06406 AIM1YAL046C 357 nt6.47□□□□□ -1.37
LSM6Q06406 ALP1YNL270C 1722 nt6.47□□□□□ -1.37
LSM6Q06406 POP2YNR052C 1302 nt6.47□□□□□ -1.37
LSM6Q06406 DUS3YLR401C 2007 nt6.47□□□□□ -1.37
LSM6Q06406 HEM13YDR044W 987 nt6.46□□□□□ -1.38
LSM6Q06406 VMA11YPL234C 495 nt6.46□□□□□ -1.38
LSM6Q06406 ADE16YLR028C 1776 nt6.45□□□□□ -1.38
LSM6Q06406 MET28YIR017C 564 nt6.45□□□□□ -1.38
LSM6Q06406 LEU4YNL104C 1860 nt6.45□□□□□ -1.38
LSM6Q06406 DPL1YDR294C 1770 nt6.44□□□□□ -1.38
LSM6Q06406 MET30YIL046W 1923 nt6.43□□□□□ -1.38
LSM6Q06406 PEX25YPL112C 1185 nt6.43□□□□□ -1.38
LSM6Q06406 snR4snR4 186 nt6.43□□□□□ -1.38
LSM6Q06406 YRF1-1YDR545W 5391 nt6.42□□□□□ -1.38
LSM6Q06406 YRF1-5YLR467W 5391 nt6.42□□□□□ -1.38
LSM6Q06406 YRF1-8YOR396W 5391 nt6.42□□□□□ -1.38
LSM6Q06406 FRA1YLL029W 2250 nt6.42□□□□□ -1.38
LSM6Q06406 ALR1YOL130W 2580 nt6.42□□□□□ -1.38
LSM6Q06406 TIP1YBR067C 633 nt6.42□□□□□ -1.38
LSM6Q06406 HXT12YIL170W 1374 nt6.42□□□□□ -1.38
LSM6Q06406 NPP2YEL016C 1482 nt6.41□□□□□ -1.38
LSM6Q06406 YNL190WYNL190W 615 nt6.41□□□□□ -1.38
LSM6Q06406 SFL1YOR140W 2301 nt6.41□□□□□ -1.38
LSM6Q06406 YER188WYER188W 720 nt6.4□□□□□ -1.38
LSM6Q06406 PAU7YAR020C 168 nt6.4□□□□□ -1.38
LSM6Q06406 ITR2YOL103W 1830 nt6.4□□□□□ -1.38
LSM6Q06406 SNX3YOR357C 489 nt6.39□□□□□ -1.39
LSM6Q06406 OSH7YHR001W 1314 nt6.39□□□□□ -1.39
LSM6Q06406 FIT3YOR383C 615 nt6.38□□□□□ -1.39
LSM6Q06406 TRP2YER090W 1524 nt6.38□□□□□ -1.39
LSM6Q06406 YRF1-3YGR296W 5580 nt6.37□□□□□ -1.39
LSM6Q06406 YRF1-6YNL339C 5580 nt6.37□□□□□ -1.39
LSM6Q06406 YRF1-7YPL283C 5580 nt6.37□□□□□ -1.39
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms