Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 YOR225WYOR225W 330 nt13.75□□□□□ -0.21
YCK3P39962 SFG1YOR315W 1041 nt13.75□□□□□ -0.21
YCK3P39962 VAB2YEL005C 849 nt13.74□□□□□ -0.21
YCK3P39962 YDR336WYDR336W 945 nt13.73□□□□□ -0.21
YCK3P39962 YHR212W-AYHR212W-A 204 nt13.73□□□□□ -0.21
YCK3P39962 YLR198CYLR198C 360 nt13.73□□□□□ -0.21
YCK3P39962 YAR061WYAR061W 204 nt13.73□□□□□ -0.21
YCK3P39962 YPL162CYPL162C 822 nt13.73□□□□□ -0.21
YCK3P39962 YJL032WYJL032W 315 nt13.72□□□□□ -0.21
YCK3P39962 YGR114CYGR114C 390 nt13.71□□□□□ -0.21
YCK3P39962 YIR021W-AYIR021W-A 213 nt13.71□□□□□ -0.21
YCK3P39962 YKR104WYKR104W 921 nt13.71□□□□□ -0.21
YCK3P39962 YHR173CYHR173C 339 nt13.7□□□□□ -0.22
YCK3P39962 BAG7YOR134W 1230 nt13.7□□□□□ -0.22
YCK3P39962 POP5YAL033W 522 nt13.69□□□□□ -0.22
YCK3P39962 BMT6YLR063W 1098 nt13.69□□□□□ -0.22
YCK3P39962 YOR097CYOR097C 528 nt13.69□□□□□ -0.22
YCK3P39962 YMR209CYMR209C 1374 nt13.67□□□□□ -0.22
YCK3P39962 YIL100WYIL100W 354 nt13.66□□□□□ -0.22
YCK3P39962 SPG3YDR504C 384 nt13.65□□□□□ -0.22
YCK3P39962 SKS1YPL026C 1509 nt13.64□□□□□ -0.23
YCK3P39962 SLU7YDR088C 1149 nt13.64□□□□□ -0.23
YCK3P39962 RDI1YDL135C 609 nt13.63□□□□□ -0.23
YCK3P39962 YGR066CYGR066C 879 nt13.63□□□□□ -0.23
YCK3P39962 MRS3YJL133W 945 nt13.63□□□□□ -0.23
YCK3P39962 RRP36YOR287C 903 nt13.63□□□□□ -0.23
YCK3P39962 TEP1YNL128W 1305 nt13.63□□□□□ -0.23
YCK3P39962 YKL162CYKL162C 1209 nt13.62□□□□□ -0.23
YCK3P39962 YKL202WYKL202W 582 nt13.62□□□□□ -0.23
YCK3P39962 FSH1YHR049W 732 nt13.61□□□□□ -0.23
YCK3P39962 YHR140WYHR140W 720 nt13.61□□□□□ -0.23
YCK3P39962 DLD2YDL178W 1593 nt13.6□□□□□ -0.23
YCK3P39962 GIM4YEL003W 336 nt13.6□□□□□ -0.23
YCK3P39962 STB1YNL309W 1263 nt13.6□□□□□ -0.23
YCK3P39962 APM1YPL259C 1428 nt13.6□□□□□ -0.23
YCK3P39962 DBP2YNL112W 1641 nt13.6□□□□□ -0.23
YCK3P39962 PCL10YGL134W 1302 nt13.6□□□□□ -0.23
YCK3P39962 SPG5YMR191W 1122 nt13.59□□□□□ -0.23
YCK3P39962 HOS2YGL194C 1359 nt13.58□□□□□ -0.23
YCK3P39962 YLR285C-AYLR285C-A 171 nt13.58□□□□□ -0.24
YCK3P39962 QRI7YDL104C 1224 nt13.57□□□□□ -0.24
YCK3P39962 COG1YGL223C 1254 nt13.57□□□□□ -0.24
YCK3P39962 TAF4YMR005W 1167 nt13.57□□□□□ -0.24
YCK3P39962 DLT1YMR126C 1029 nt13.57□□□□□ -0.24
YCK3P39962 BTS1YPL069C 1008 nt13.57□□□□□ -0.24
YCK3P39962 COG7YGL005C 840 nt13.56□□□□□ -0.24
YCK3P39962 PEF1YGR058W 1008 nt13.56□□□□□ -0.24
YCK3P39962 VAM3YOR106W 852 nt13.56□□□□□ -0.24
YCK3P39962 YPL199CYPL199C 723 nt13.56□□□□□ -0.24
YCK3P39962 CTR1YPR124W 1221 nt13.56□□□□□ -0.24
YCK3P39962 RSR1YGR152C 819 nt13.55□□□□□ -0.24
YCK3P39962 REV7YIL139C 738 nt13.55□□□□□ -0.24
YCK3P39962 PEX22YAL055W 543 nt13.55□□□□□ -0.24
YCK3P39962 MHT1YLL062C 975 nt13.55□□□□□ -0.24
YCK3P39962 YNL174WYNL174W 573 nt13.55□□□□□ -0.24
YCK3P39962 LTO1YNL260C 597 nt13.55□□□□□ -0.24
YCK3P39962 AVT2YEL064C 1443 nt13.55□□□□□ -0.24
YCK3P39962 ADE1YAR015W 921 nt13.54□□□□□ -0.24
YCK3P39962 GET2YER083C 858 nt13.53□□□□□ -0.24
YCK3P39962 RNH1YMR234W 1047 nt13.53□□□□□ -0.24
YCK3P39962 TLG2YOL018C 1194 nt13.53□□□□□ -0.24
YCK3P39962 YOL085CYOL085C 342 nt13.53□□□□□ -0.24
YCK3P39962 YBR013CYBR013C 390 nt13.53□□□□□ -0.24
YCK3P39962 SCD6YPR129W 1050 nt13.53□□□□□ -0.24
YCK3P39962 snR34snR34 203 nt13.53□□□□□ -0.24
YCK3P39962 YHR022CYHR022C 771 nt13.52□□□□□ -0.25
YCK3P39962 YBL029C-AYBL029C-A 285 nt13.52□□□□□ -0.25
YCK3P39962 USV1YPL230W 1176 nt13.51□□□□□ -0.25
YCK3P39962 CSM1YCR086W 573 nt13.5□□□□□ -0.25
YCK3P39962 YDL172CYDL172C 480 nt13.5□□□□□ -0.25
YCK3P39962 STE18YJR086W 333 nt13.5□□□□□ -0.25
YCK3P39962 YLR049CYLR049C 1287 nt13.5□□□□□ -0.25
YCK3P39962 RNH202YDR279W 1053 nt13.49□□□□□ -0.25
YCK3P39962 SAS2YMR127C 1017 nt13.49□□□□□ -0.25
YCK3P39962 GLO4YOR040W 858 nt13.49□□□□□ -0.25
YCK3P39962 YOR152CYOR152C 771 nt13.49□□□□□ -0.25
YCK3P39962 TIF5YPR041W 1218 nt13.49□□□□□ -0.25
YCK3P39962 DEG1YFL001W 1329 nt13.48□□□□□ -0.25
YCK3P39962 HTB1YDR224C 396 nt13.48□□□□□ -0.25
YCK3P39962 GEP7YGL057C 864 nt13.48□□□□□ -0.25
YCK3P39962 DSD1YGL196W 1287 nt13.48□□□□□ -0.25
YCK3P39962 RRT1YBL048W 312 nt13.48□□□□□ -0.25
YCK3P39962 DSC2YOL073C 969 nt13.48□□□□□ -0.25
YCK3P39962 NRG2YBR066C 663 nt13.48□□□□□ -0.25
YCK3P39962 MHO1YJR008W 1017 nt13.47□□□□□ -0.25
YCK3P39962 YNR048WYNR048W 1182 nt13.47□□□□□ -0.25
YCK3P39962 SSU72YNL222W 621 nt13.46□□□□□ -0.25
YCK3P39962 RSA1YPL193W 1146 nt13.46□□□□□ -0.25
YCK3P39962 ISA2YPR067W 558 nt13.46□□□□□ -0.25
YCK3P39962 MRPS9YBR146W 837 nt13.46□□□□□ -0.25
YCK3P39962 SSU1YPL092W 1377 nt13.45□□□□□ -0.26
YCK3P39962 LST7YGR057C 729 nt13.45□□□□□ -0.26
YCK3P39962 YDR306CYDR306C 1437 nt13.45□□□□□ -0.26
YCK3P39962 NMD4YLR363C 657 nt13.44□□□□□ -0.26
YCK3P39962 YBL029WYBL029W 1131 nt13.44□□□□□ -0.26
YCK3P39962 AVT5YBL089W 1380 nt13.44□□□□□ -0.26
YCK3P39962 GAT1YFL021W 1533 nt13.44□□□□□ -0.26
YCK3P39962 TRP4YDR354W 1143 nt13.43□□□□□ -0.26
YCK3P39962 YLR222C-AYLR222C-A 231 nt13.43□□□□□ -0.26
YCK3P39962 TIS11YLR136C 858 nt13.42□□□□□ -0.26
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms