Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDKN1AP38936 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDKN1AP38936 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.84■■□□□ 1.25
CDKN1AP38936 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.84■■□□□ 1.25
CDKN1AP38936 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDKN1AP38936 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDKN1AP38936 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.83■■□□□ 1.25
CDKN1AP38936 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
CDKN1AP38936 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
CDKN1AP38936 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
CDKN1AP38936 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.82■■□□□ 1.24
CDKN1AP38936 AC021231.2-201ENST00000594613 730 ntBASIC22.82■■□□□ 1.24
CDKN1AP38936 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CDKN1AP38936 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDKN1AP38936 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDKN1AP38936 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDKN1AP38936 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDKN1AP38936 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CDKN1AP38936 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.8■■□□□ 1.24
CDKN1AP38936 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDKN1AP38936 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CDKN1AP38936 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDKN1AP38936 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.79■■□□□ 1.24
CDKN1AP38936 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDKN1AP38936 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CDKN1AP38936 MIR6090-201ENST00000622481 60 ntBASIC22.78■■□□□ 1.24
CDKN1AP38936 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CDKN1AP38936 AC108673.1-201ENST00000510422 1159 ntBASIC22.77■■□□□ 1.24
CDKN1AP38936 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CDKN1AP38936 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
CDKN1AP38936 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CDKN1AP38936 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDKN1AP38936 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDKN1AP38936 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CDKN1AP38936 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CDKN1AP38936 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.74■■□□□ 1.23
CDKN1AP38936 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDKN1AP38936 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDKN1AP38936 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDKN1AP38936 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDKN1AP38936 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDKN1AP38936 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.71■■□□□ 1.23
CDKN1AP38936 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.7■■□□□ 1.22
CDKN1AP38936 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC22.7■■□□□ 1.22
CDKN1AP38936 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.7■■□□□ 1.22
CDKN1AP38936 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDKN1AP38936 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDKN1AP38936 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CDKN1AP38936 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDKN1AP38936 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
CDKN1AP38936 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDKN1AP38936 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDKN1AP38936 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDKN1AP38936 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CDKN1AP38936 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.66■■□□□ 1.22
CDKN1AP38936 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.66■■□□□ 1.22
CDKN1AP38936 AC120057.4-201ENST00000624722 1615 ntBASIC22.65■■□□□ 1.22
CDKN1AP38936 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.65■■□□□ 1.22
CDKN1AP38936 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CDKN1AP38936 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.64■■□□□ 1.21
CDKN1AP38936 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDKN1AP38936 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDKN1AP38936 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDKN1AP38936 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDKN1AP38936 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDKN1AP38936 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.63■■□□□ 1.21
CDKN1AP38936 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDKN1AP38936 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDKN1AP38936 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDKN1AP38936 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDKN1AP38936 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.61■■□□□ 1.21
CDKN1AP38936 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDKN1AP38936 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDKN1AP38936 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.59■■□□□ 1.21
CDKN1AP38936 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.59■■□□□ 1.21
CDKN1AP38936 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
CDKN1AP38936 AC016575.1-201ENST00000607026 382 ntBASIC22.58■■□□□ 1.21
CDKN1AP38936 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDKN1AP38936 MIR639-201ENST00000384974 98 ntBASIC22.57■■□□□ 1.2
CDKN1AP38936 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.57■■□□□ 1.2
CDKN1AP38936 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDKN1AP38936 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CDKN1AP38936 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDKN1AP38936 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.57■■□□□ 1.2
CDKN1AP38936 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDKN1AP38936 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDKN1AP38936 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDKN1AP38936 MIR4449-201ENST00000578365 66 ntBASIC22.56■■□□□ 1.2
CDKN1AP38936 MIR3648-2-201ENST00000581792 180 ntBASIC22.56■■□□□ 1.2
CDKN1AP38936 DUX4L11-201ENST00000611504 1267 ntBASIC22.56■■□□□ 1.2
CDKN1AP38936 DUX4L12-201ENST00000614593 1267 ntBASIC22.56■■□□□ 1.2
CDKN1AP38936 MIR3648-1-201ENST00000615959 180 ntBASIC22.56■■□□□ 1.2
CDKN1AP38936 DUX4L14-201ENST00000621227 1267 ntBASIC22.56■■□□□ 1.2
CDKN1AP38936 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.56■■□□□ 1.2
CDKN1AP38936 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDKN1AP38936 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CDKN1AP38936 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDKN1AP38936 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.54■■□□□ 1.2
CDKN1AP38936 LINC01971-201ENST00000617888 1048 ntBASIC22.54■■□□□ 1.2
CDKN1AP38936 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms