Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.64■■□□□ 1.86
SDHBP21912 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SDHBP21912 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.62■■□□□ 1.85
SDHBP21912 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
SDHBP21912 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SDHBP21912 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.61■■□□□ 1.85
SDHBP21912 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SDHBP21912 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.59■■□□□ 1.85
SDHBP21912 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SDHBP21912 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SDHBP21912 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.56■■□□□ 1.84
SDHBP21912 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
SDHBP21912 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SDHBP21912 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SDHBP21912 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.55■■□□□ 1.84
SDHBP21912 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
SDHBP21912 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.55■■□□□ 1.84
SDHBP21912 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
SDHBP21912 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SDHBP21912 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.54■■□□□ 1.84
SDHBP21912 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.54■■□□□ 1.84
SDHBP21912 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SDHBP21912 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SDHBP21912 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SDHBP21912 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.52■■□□□ 1.84
SDHBP21912 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.52■■□□□ 1.84
SDHBP21912 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.52■■□□□ 1.84
SDHBP21912 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SDHBP21912 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SDHBP21912 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.48■■□□□ 1.83
SDHBP21912 MIR6090-201ENST00000622481 60 ntBASIC26.48■■□□□ 1.83
SDHBP21912 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.46■■□□□ 1.83
SDHBP21912 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.46■■□□□ 1.83
SDHBP21912 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SDHBP21912 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SDHBP21912 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SDHBP21912 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SDHBP21912 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SDHBP21912 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SDHBP21912 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SDHBP21912 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SDHBP21912 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SDHBP21912 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SDHBP21912 RNF126P1-201ENST00000567452 1320 ntBASIC26.44■■□□□ 1.82
SDHBP21912 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SDHBP21912 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SDHBP21912 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.43■■□□□ 1.82
SDHBP21912 AC012354.3-201ENST00000623734 483 ntBASIC26.43■■□□□ 1.82
SDHBP21912 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.43■■□□□ 1.82
SDHBP21912 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.43■■□□□ 1.82
SDHBP21912 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SDHBP21912 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SDHBP21912 DUX4L13-201ENST00000554103 1267 ntBASIC26.42■■□□□ 1.82
SDHBP21912 DUX4L15-201ENST00000611059 1267 ntBASIC26.42■■□□□ 1.82
SDHBP21912 DUX4L23-201ENST00000615195 1269 ntBASIC26.42■■□□□ 1.82
SDHBP21912 DUX4L24-201ENST00000617576 1269 ntBASIC26.42■■□□□ 1.82
SDHBP21912 DUX4L22-201ENST00000618238 1269 ntBASIC26.42■■□□□ 1.82
SDHBP21912 DUX4L20-201ENST00000619712 1269 ntBASIC26.42■■□□□ 1.82
SDHBP21912 DUX4L21-201ENST00000622058 1269 ntBASIC26.42■■□□□ 1.82
SDHBP21912 DUX4L10-201ENST00000622460 1267 ntBASIC26.42■■□□□ 1.82
SDHBP21912 DUX4L25-201ENST00000624915 1269 ntBASIC26.42■■□□□ 1.82
SDHBP21912 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.41■■□□□ 1.82
SDHBP21912 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.41■■□□□ 1.82
SDHBP21912 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SDHBP21912 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SDHBP21912 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
SDHBP21912 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SDHBP21912 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SDHBP21912 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SDHBP21912 GPX1-201ENST00000419349 1106 ntBASIC26.38■■□□□ 1.81
SDHBP21912 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SDHBP21912 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SDHBP21912 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.37■■□□□ 1.81
SDHBP21912 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
SDHBP21912 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
SDHBP21912 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.36■■□□□ 1.81
SDHBP21912 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
SDHBP21912 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
SDHBP21912 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SDHBP21912 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SDHBP21912 NTF6A-201ENST00000591175 560 ntBASIC26.34■■□□□ 1.81
SDHBP21912 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
SDHBP21912 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
SDHBP21912 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SDHBP21912 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SDHBP21912 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.29■■□□□ 1.8
SDHBP21912 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.29■■□□□ 1.8
SDHBP21912 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.28■■□□□ 1.8
SDHBP21912 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.28■■□□□ 1.8
SDHBP21912 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SDHBP21912 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SDHBP21912 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.24■■□□□ 1.79
SDHBP21912 AC018358.1-201ENST00000631079 1402 ntBASIC26.24■■□□□ 1.79
SDHBP21912 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.24■■□□□ 1.79
SDHBP21912 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SDHBP21912 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SDHBP21912 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
SDHBP21912 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
SDHBP21912 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SDHBP21912 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms