Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.91■■■□□ 2.54
Setdb1O88974 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Setdb1O88974 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Setdb1O88974 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
Setdb1O88974 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Setdb1O88974 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Setdb1O88974 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Setdb1O88974 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
Setdb1O88974 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Setdb1O88974 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Setdb1O88974 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Setdb1O88974 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Setdb1O88974 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Setdb1O88974 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.78■■■□□ 2.52
Setdb1O88974 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Setdb1O88974 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.76■■■□□ 2.52
Setdb1O88974 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.75■■■□□ 2.51
Setdb1O88974 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.75■■■□□ 2.51
Setdb1O88974 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Setdb1O88974 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.74■■■□□ 2.51
Setdb1O88974 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Setdb1O88974 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Setdb1O88974 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Setdb1O88974 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Setdb1O88974 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Setdb1O88974 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Setdb1O88974 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.71■■■□□ 2.51
Setdb1O88974 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.71■■■□□ 2.51
Setdb1O88974 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Setdb1O88974 Gm7432-201ENSMUST00000210343 879 ntBASIC30.7■■■□□ 2.5
Setdb1O88974 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Setdb1O88974 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Setdb1O88974 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Setdb1O88974 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Setdb1O88974 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
Setdb1O88974 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Setdb1O88974 Nkain2-201ENSMUST00000092602 558 ntBASIC30.63■■■□□ 2.49
Setdb1O88974 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
Setdb1O88974 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Setdb1O88974 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Setdb1O88974 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Setdb1O88974 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Setdb1O88974 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Setdb1O88974 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Setdb1O88974 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Setdb1O88974 Gm11175-201ENSMUST00000116172 543 ntBASIC30.59■■■□□ 2.49
Setdb1O88974 Mir6538-201ENSMUST00000183713 110 ntBASIC30.58■■■□□ 2.49
Setdb1O88974 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.57■■■□□ 2.48
Setdb1O88974 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Setdb1O88974 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Setdb1O88974 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Setdb1O88974 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Setdb1O88974 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Setdb1O88974 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
Setdb1O88974 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Setdb1O88974 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.54■■■□□ 2.48
Setdb1O88974 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.53■■■□□ 2.48
Setdb1O88974 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Setdb1O88974 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
Setdb1O88974 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Setdb1O88974 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.5■■■□□ 2.47
Setdb1O88974 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
Setdb1O88974 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Setdb1O88974 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Setdb1O88974 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Setdb1O88974 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.47■■■□□ 2.47
Setdb1O88974 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC30.46■■■□□ 2.47
Setdb1O88974 Gm11599-201ENSMUST00000118720 878 ntBASIC30.46■■■□□ 2.47
Setdb1O88974 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Setdb1O88974 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC30.45■■■□□ 2.46
Setdb1O88974 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Setdb1O88974 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Setdb1O88974 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Setdb1O88974 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Setdb1O88974 Cap2-205ENSMUST00000225824 1634 ntBASIC30.42■■■□□ 2.46
Setdb1O88974 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Setdb1O88974 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Setdb1O88974 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Setdb1O88974 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Setdb1O88974 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.39■■■□□ 2.46
Setdb1O88974 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Setdb1O88974 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Setdb1O88974 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.37■■■□□ 2.45
Setdb1O88974 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Setdb1O88974 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
Setdb1O88974 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Setdb1O88974 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Setdb1O88974 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Setdb1O88974 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.35■■■□□ 2.45
Setdb1O88974 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
Setdb1O88974 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.33■■■□□ 2.45
Setdb1O88974 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Setdb1O88974 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.33■■■□□ 2.45
Setdb1O88974 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Setdb1O88974 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Setdb1O88974 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Setdb1O88974 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Setdb1O88974 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Setdb1O88974 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Setdb1O88974 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms