Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tgfbr3O88393 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Tgfbr3O88393 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Tgfbr3O88393 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Tgfbr3O88393 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.13■■□□□ 1.45
Tgfbr3O88393 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.13■■□□□ 1.45
Tgfbr3O88393 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tgfbr3O88393 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.12■■□□□ 1.45
Tgfbr3O88393 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tgfbr3O88393 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Tgfbr3O88393 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Tgfbr3O88393 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Tgfbr3O88393 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Tgfbr3O88393 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.08■■□□□ 1.45
Tgfbr3O88393 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Tgfbr3O88393 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.08■■□□□ 1.45
Tgfbr3O88393 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Tgfbr3O88393 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Tgfbr3O88393 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Tgfbr3O88393 Nkain2-201ENSMUST00000092602 558 ntBASIC24.06■■□□□ 1.44
Tgfbr3O88393 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Tgfbr3O88393 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Tgfbr3O88393 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tgfbr3O88393 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Tgfbr3O88393 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Tgfbr3O88393 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Tgfbr3O88393 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tgfbr3O88393 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.02■■□□□ 1.44
Tgfbr3O88393 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tgfbr3O88393 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tgfbr3O88393 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.01■■□□□ 1.43
Tgfbr3O88393 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Tgfbr3O88393 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Tgfbr3O88393 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.99■■□□□ 1.43
Tgfbr3O88393 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tgfbr3O88393 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tgfbr3O88393 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Tgfbr3O88393 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Tgfbr3O88393 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Tgfbr3O88393 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tgfbr3O88393 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.95■■□□□ 1.42
Tgfbr3O88393 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tgfbr3O88393 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Tgfbr3O88393 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
Tgfbr3O88393 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Tgfbr3O88393 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Tgfbr3O88393 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Tgfbr3O88393 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.92■■□□□ 1.42
Tgfbr3O88393 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.91■■□□□ 1.42
Tgfbr3O88393 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Tgfbr3O88393 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Tgfbr3O88393 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Tgfbr3O88393 Gm7432-201ENSMUST00000210343 879 ntBASIC23.87■■□□□ 1.41
Tgfbr3O88393 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tgfbr3O88393 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Tgfbr3O88393 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tgfbr3O88393 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Tgfbr3O88393 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.83■■□□□ 1.41
Tgfbr3O88393 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.83■■□□□ 1.41
Tgfbr3O88393 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Tgfbr3O88393 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Tgfbr3O88393 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Tgfbr3O88393 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Tgfbr3O88393 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Tgfbr3O88393 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Tgfbr3O88393 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Tgfbr3O88393 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.77■■□□□ 1.4
Tgfbr3O88393 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tgfbr3O88393 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tgfbr3O88393 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.76■■□□□ 1.39
Tgfbr3O88393 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Tgfbr3O88393 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
Tgfbr3O88393 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Tgfbr3O88393 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Tgfbr3O88393 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Tgfbr3O88393 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tgfbr3O88393 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tgfbr3O88393 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tgfbr3O88393 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Tgfbr3O88393 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Tgfbr3O88393 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
Tgfbr3O88393 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
Tgfbr3O88393 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Tgfbr3O88393 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Tgfbr3O88393 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tgfbr3O88393 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Tgfbr3O88393 Gm11599-201ENSMUST00000118720 878 ntBASIC23.69■■□□□ 1.38
Tgfbr3O88393 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.69■■□□□ 1.38
Tgfbr3O88393 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Tgfbr3O88393 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.67■■□□□ 1.38
Tgfbr3O88393 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.65■■□□□ 1.38
Tgfbr3O88393 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tgfbr3O88393 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Tgfbr3O88393 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tgfbr3O88393 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Tgfbr3O88393 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.61■■□□□ 1.37
Tgfbr3O88393 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.61■■□□□ 1.37
Tgfbr3O88393 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.61■■□□□ 1.37
Tgfbr3O88393 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.61■■□□□ 1.37
Tgfbr3O88393 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 117 ms