Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24,66■■□□□ 1,54
Tspan6O70401 Gm8503-201ENSMUST00000118131 455 ntBASIC24,66■■□□□ 1,54
Tspan6O70401 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24,66■■□□□ 1,54
Tspan6O70401 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,53
Tspan6O70401 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24,64■■□□□ 1,53
Tspan6O70401 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24,63■■□□□ 1,53
Tspan6O70401 Gm6821-201ENSMUST00000107540 542 ntBASIC24,62■■□□□ 1,53
Tspan6O70401 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24,6■■□□□ 1,53
Tspan6O70401 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24,6■■□□□ 1,53
Tspan6O70401 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24,59■■□□□ 1,53
Tspan6O70401 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24,58■■□□□ 1,53
Tspan6O70401 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24,57■■□□□ 1,52
Tspan6O70401 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24,57■■□□□ 1,52
Tspan6O70401 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24,57■■□□□ 1,52
Tspan6O70401 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24,56■■□□□ 1,52
Tspan6O70401 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24,56■■□□□ 1,52
Tspan6O70401 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24,56■■□□□ 1,52
Tspan6O70401 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24,56■■□□□ 1,52
Tspan6O70401 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24,54■■□□□ 1,52
Tspan6O70401 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24,53■■□□□ 1,52
Tspan6O70401 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24,52■■□□□ 1,52
Tspan6O70401 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24,51■■□□□ 1,51
Tspan6O70401 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24,51■■□□□ 1,51
Tspan6O70401 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24,5■■□□□ 1,51
Tspan6O70401 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24,49■■□□□ 1,51
Tspan6O70401 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24,49■■□□□ 1,51
Tspan6O70401 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24,48■■□□□ 1,51
Tspan6O70401 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24,47■■□□□ 1,51
Tspan6O70401 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24,47■■□□□ 1,51
Tspan6O70401 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24,47■■□□□ 1,51
Tspan6O70401 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24,47■■□□□ 1,51
Tspan6O70401 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24,46■■□□□ 1,51
Tspan6O70401 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24,46■■□□□ 1,51
Tspan6O70401 Gm42809-201ENSMUST00000198429 1138 ntBASIC24,46■■□□□ 1,51
Tspan6O70401 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24,46■■□□□ 1,51
Tspan6O70401 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24,45■■□□□ 1,51
Tspan6O70401 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24,45■■□□□ 1,5
Tspan6O70401 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24,44■■□□□ 1,5
Tspan6O70401 Gm5987-201ENSMUST00000196433 1151 ntBASIC24,44■■□□□ 1,5
Tspan6O70401 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24,44■■□□□ 1,5
Tspan6O70401 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24,41■■□□□ 1,5
Tspan6O70401 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24,41■■□□□ 1,5
Tspan6O70401 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24,41■■□□□ 1,5
Tspan6O70401 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24,41■■□□□ 1,5
Tspan6O70401 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24,4■■□□□ 1,5
Tspan6O70401 Nkain2-201ENSMUST00000092602 558 ntBASIC24,4■■□□□ 1,5
Tspan6O70401 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24,38■■□□□ 1,49
Tspan6O70401 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24,38■■□□□ 1,49
Tspan6O70401 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24,37■■□□□ 1,49
Tspan6O70401 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24,37■■□□□ 1,49
Tspan6O70401 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24,37■■□□□ 1,49
Tspan6O70401 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24,37■■□□□ 1,49
Tspan6O70401 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24,36■■□□□ 1,49
Tspan6O70401 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24,36■■□□□ 1,49
Tspan6O70401 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24,34■■□□□ 1,49
Tspan6O70401 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Tspan6O70401 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24,33■■□□□ 1,49
Tspan6O70401 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24,33■■□□□ 1,49
Tspan6O70401 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24,32■■□□□ 1,48
Tspan6O70401 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24,32■■□□□ 1,48
Tspan6O70401 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24,32■■□□□ 1,48
Tspan6O70401 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24,32■■□□□ 1,48
Tspan6O70401 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24,31■■□□□ 1,48
Tspan6O70401 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24,31■■□□□ 1,48
Tspan6O70401 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24,3■■□□□ 1,48
Tspan6O70401 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24,3■■□□□ 1,48
Tspan6O70401 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24,29■■□□□ 1,48
Tspan6O70401 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24,29■■□□□ 1,48
Tspan6O70401 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24,29■■□□□ 1,48
Tspan6O70401 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24,29■■□□□ 1,48
Tspan6O70401 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24,28■■□□□ 1,48
Tspan6O70401 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24,28■■□□□ 1,48
Tspan6O70401 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24,28■■□□□ 1,48
Tspan6O70401 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24,27■■□□□ 1,48
Tspan6O70401 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24,26■■□□□ 1,47
Tspan6O70401 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24,25■■□□□ 1,47
Tspan6O70401 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24,25■■□□□ 1,47
Tspan6O70401 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24,25■■□□□ 1,47
Tspan6O70401 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24,24■■□□□ 1,47
Tspan6O70401 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24,22■■□□□ 1,47
Tspan6O70401 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24,22■■□□□ 1,47
Tspan6O70401 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24,22■■□□□ 1,47
Tspan6O70401 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24,22■■□□□ 1,47
Tspan6O70401 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24,22■■□□□ 1,47
Tspan6O70401 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24,22■■□□□ 1,47
Tspan6O70401 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24,19■■□□□ 1,46
Tspan6O70401 Gm6345-201ENSMUST00000180378 1691 ntBASIC24,19■■□□□ 1,46
Tspan6O70401 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24,19■■□□□ 1,46
Tspan6O70401 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24,19■■□□□ 1,46
Tspan6O70401 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Tspan6O70401 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24,19■■□□□ 1,46
Tspan6O70401 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24,18■■□□□ 1,46
Tspan6O70401 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24,17■■□□□ 1,46
Tspan6O70401 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24,17■■□□□ 1,46
Tspan6O70401 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24,17■■□□□ 1,46
Tspan6O70401 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24,17■■□□□ 1,46
Tspan6O70401 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24,14■■□□□ 1,45
Tspan6O70401 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24,13■■□□□ 1,45
Tspan6O70401 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24,13■■□□□ 1,45
Tspan6O70401 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24,13■■□□□ 1,45
Retrieved 100 of 76,532 protein–RNA pairs in 12,4 ms