Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ighv3-4A0A0A6YXF1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Ighv3-4A0A0A6YXF1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv3-4A0A0A6YXF1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.04■□□□□ 0.96
Ighv3-4A0A0A6YXF1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv3-4A0A0A6YXF1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.04■□□□□ 0.96
Ighv3-4A0A0A6YXF1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv3-4A0A0A6YXF1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Nkain2-201ENSMUST00000092602 558 ntBASIC21■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv3-4A0A0A6YXF1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.99■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.98■□□□□ 0.95
Ighv3-4A0A0A6YXF1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.96■□□□□ 0.95
Ighv3-4A0A0A6YXF1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.94■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv3-4A0A0A6YXF1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.93■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.9■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv3-4A0A0A6YXF1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ighv3-4A0A0A6YXF1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ighv3-4A0A0A6YXF1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv3-4A0A0A6YXF1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.87■□□□□ 0.93
Ighv3-4A0A0A6YXF1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Ighv3-4A0A0A6YXF1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ighv3-4A0A0A6YXF1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.86■□□□□ 0.93
Ighv3-4A0A0A6YXF1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv3-4A0A0A6YXF1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ighv3-4A0A0A6YXF1 Gm7432-201ENSMUST00000210343 879 ntBASIC20.85■□□□□ 0.93
Ighv3-4A0A0A6YXF1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
Ighv3-4A0A0A6YXF1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ighv3-4A0A0A6YXF1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ighv3-4A0A0A6YXF1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Ighv3-4A0A0A6YXF1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ighv3-4A0A0A6YXF1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv3-4A0A0A6YXF1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv3-4A0A0A6YXF1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Ighv3-4A0A0A6YXF1 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.77■□□□□ 0.92
Ighv3-4A0A0A6YXF1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv3-4A0A0A6YXF1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ighv3-4A0A0A6YXF1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ighv3-4A0A0A6YXF1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ighv3-4A0A0A6YXF1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv3-4A0A0A6YXF1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv3-4A0A0A6YXF1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv3-4A0A0A6YXF1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv3-4A0A0A6YXF1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv3-4A0A0A6YXF1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv3-4A0A0A6YXF1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv3-4A0A0A6YXF1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv3-4A0A0A6YXF1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.73■□□□□ 0.91
Ighv3-4A0A0A6YXF1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.73■□□□□ 0.91
Ighv3-4A0A0A6YXF1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ighv3-4A0A0A6YXF1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv3-4A0A0A6YXF1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv3-4A0A0A6YXF1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ighv3-4A0A0A6YXF1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ighv3-4A0A0A6YXF1 Gm11599-201ENSMUST00000118720 878 ntBASIC20.69■□□□□ 0.9
Ighv3-4A0A0A6YXF1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ighv3-4A0A0A6YXF1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ighv3-4A0A0A6YXF1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
Ighv3-4A0A0A6YXF1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ighv3-4A0A0A6YXF1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ighv3-4A0A0A6YXF1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv3-4A0A0A6YXF1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.66■□□□□ 0.9
Ighv3-4A0A0A6YXF1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ighv3-4A0A0A6YXF1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.66■□□□□ 0.9
Ighv3-4A0A0A6YXF1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ighv3-4A0A0A6YXF1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ighv3-4A0A0A6YXF1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ighv3-4A0A0A6YXF1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.62■□□□□ 0.89
Ighv3-4A0A0A6YXF1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv3-4A0A0A6YXF1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv3-4A0A0A6YXF1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ighv3-4A0A0A6YXF1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ighv3-4A0A0A6YXF1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.59■□□□□ 0.89
Ighv3-4A0A0A6YXF1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv3-4A0A0A6YXF1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.58■□□□□ 0.89
Ighv3-4A0A0A6YXF1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms