Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.48□□□□□ -0.09
SPCS1Q9Y6A9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPCS1Q9Y6A9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SPCS1Q9Y6A9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS1Q9Y6A9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS1Q9Y6A9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS1Q9Y6A9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS1Q9Y6A9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC14.46□□□□□ -0.09
SPCS1Q9Y6A9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SPCS1Q9Y6A9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS1Q9Y6A9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.46□□□□□ -0.09
SPCS1Q9Y6A9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS1Q9Y6A9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPCS1Q9Y6A9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.1
SPCS1Q9Y6A9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
SPCS1Q9Y6A9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
SPCS1Q9Y6A9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPCS1Q9Y6A9 AL032819.2-201ENST00000624543 2162 ntBASIC14.46□□□□□ -0.1
SPCS1Q9Y6A9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPCS1Q9Y6A9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPCS1Q9Y6A9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 PKD1P1-201ENST00000458669 6805 ntBASIC14.44□□□□□ -0.1
SPCS1Q9Y6A9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms