Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 AC003102.1-202ENST00000563394 1796 ntBASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
HCFC2Q9Y5Z7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HCFC2Q9Y5Z7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 AC008550.1-201ENST00000511500 884 ntBASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 AC008403.3-201ENST00000598924 454 ntBASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
HCFC2Q9Y5Z7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 AC091799.1-201ENST00000422823 811 ntBASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 FAM21FP-204ENST00000608637 956 ntBASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
HCFC2Q9Y5Z7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC2Q9Y5Z7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC2Q9Y5Z7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC2Q9Y5Z7 UBE2SP1-201ENST00000450587 669 ntBASIC22.1■■□□□ 1.13
HCFC2Q9Y5Z7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.1■■□□□ 1.13
HCFC2Q9Y5Z7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC2Q9Y5Z7 AC060766.5-201ENST00000590539 871 ntBASIC22.1■■□□□ 1.13
HCFC2Q9Y5Z7 CYP2T3P-201ENST00000601990 817 ntBASIC22.1■■□□□ 1.13
HCFC2Q9Y5Z7 AL359736.2-201ENST00000621992 437 ntBASIC22.1■■□□□ 1.13
HCFC2Q9Y5Z7 AC093323.1-202ENST00000635031 2045 ntBASIC22.1■■□□□ 1.13
HCFC2Q9Y5Z7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC2Q9Y5Z7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HCFC2Q9Y5Z7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.1■■□□□ 1.13
HCFC2Q9Y5Z7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
HCFC2Q9Y5Z7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.09■■□□□ 1.13
HCFC2Q9Y5Z7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
HCFC2Q9Y5Z7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HCFC2Q9Y5Z7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HCFC2Q9Y5Z7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HCFC2Q9Y5Z7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HCFC2Q9Y5Z7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.09■■□□□ 1.13
HCFC2Q9Y5Z7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.09■■□□□ 1.13
HCFC2Q9Y5Z7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.09■■□□□ 1.13
HCFC2Q9Y5Z7 AC100791.3-201ENST00000617619 330 ntBASIC22.09■■□□□ 1.13
HCFC2Q9Y5Z7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
HCFC2Q9Y5Z7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
HCFC2Q9Y5Z7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
HCFC2Q9Y5Z7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
HCFC2Q9Y5Z7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.08■■□□□ 1.13
HCFC2Q9Y5Z7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HCFC2Q9Y5Z7 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.08■■□□□ 1.13
HCFC2Q9Y5Z7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HCFC2Q9Y5Z7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HCFC2Q9Y5Z7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
HCFC2Q9Y5Z7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
HCFC2Q9Y5Z7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
HCFC2Q9Y5Z7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HCFC2Q9Y5Z7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.08■■□□□ 1.13
HCFC2Q9Y5Z7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
HCFC2Q9Y5Z7 HLA-B-256ENST00000639848 1089 ntBASIC22.08■■□□□ 1.13
HCFC2Q9Y5Z7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
HCFC2Q9Y5Z7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
HCFC2Q9Y5Z7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.08■■□□□ 1.12
HCFC2Q9Y5Z7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
HCFC2Q9Y5Z7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms