Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 EEF1DP3-203ENST00000566025 782 ntBASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 AC011767.1-201ENST00000617410 1153 ntBASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
KDM3AQ9Y4C1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 AC053503.5-201ENST00000601508 636 ntBASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 AC104187.1-201ENST00000607510 612 ntBASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 Z98882.1-201ENST00000622160 2253 ntBASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KDM3AQ9Y4C1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
KDM3AQ9Y4C1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
KDM3AQ9Y4C1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
KDM3AQ9Y4C1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
KDM3AQ9Y4C1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.7■■□□□ 1.38
KDM3AQ9Y4C1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
KDM3AQ9Y4C1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
KDM3AQ9Y4C1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
KDM3AQ9Y4C1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.7■■□□□ 1.38
KDM3AQ9Y4C1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
KDM3AQ9Y4C1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
KDM3AQ9Y4C1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.7■■□□□ 1.38
KDM3AQ9Y4C1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.7■■□□□ 1.38
KDM3AQ9Y4C1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.7■■□□□ 1.38
KDM3AQ9Y4C1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 CROCCP5-201ENST00000436658 830 ntBASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
KDM3AQ9Y4C1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KDM3AQ9Y4C1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 MFSD11-216ENST00000590393 1141 ntBASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KDM3AQ9Y4C1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms