Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 AC010525.1-201ENST00000585559 441 ntBASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 AC092171.4-201ENST00000609130 632 ntBASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 AC073314.1-201ENST00000568729 2216 ntBASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 AP006587.3-201ENST00000525742 1516 ntBASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 PLK5-205ENST00000642079 1969 ntBASIC14.6□□□□□ -0.07
UBE2D4Q9Y2X8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 KRT16P3-201ENST00000439127 1283 ntBASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBE2D4Q9Y2X8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.58□□□□□ -0.07
UBE2D4Q9Y2X8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
UBE2D4Q9Y2X8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
UBE2D4Q9Y2X8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
UBE2D4Q9Y2X8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
UBE2D4Q9Y2X8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 RARRES2P1-201ENST00000474487 481 ntBASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 AL356740.2-201ENST00000601559 647 ntBASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UBE2D4Q9Y2X8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 SRD5A1P1-201ENST00000442297 786 ntBASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.57□□□□□ -0.08
UBE2D4Q9Y2X8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms