Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 MIR939-201ENST00000401314 82 ntBASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1DQ9Y2S0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1DQ9Y2S0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR1DQ9Y2S0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR1DQ9Y2S0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1DQ9Y2S0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR1DQ9Y2S0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR1DQ9Y2S0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1DQ9Y2S0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR1DQ9Y2S0 AL139246.5-201ENST00000606645 996 ntBASIC18.72■□□□□ 0.59
POLR1DQ9Y2S0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1DQ9Y2S0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1DQ9Y2S0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR1DQ9Y2S0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
POLR1DQ9Y2S0 HCG11-201ENST00000411553 5696 ntBASIC18.72■□□□□ 0.59
POLR1DQ9Y2S0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR1DQ9Y2S0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR1DQ9Y2S0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1DQ9Y2S0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1DQ9Y2S0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
POLR1DQ9Y2S0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1DQ9Y2S0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1DQ9Y2S0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1DQ9Y2S0 AC009237.3-201ENST00000393279 1427 ntBASIC18.71■□□□□ 0.59
POLR1DQ9Y2S0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
POLR1DQ9Y2S0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.71■□□□□ 0.59
POLR1DQ9Y2S0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
POLR1DQ9Y2S0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 AC142381.2-201ENST00000566120 298 ntBASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.7■□□□□ 0.58
POLR1DQ9Y2S0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 AC005229.4-201ENST00000610085 2198 ntBASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.69■□□□□ 0.58
POLR1DQ9Y2S0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1DQ9Y2S0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.68■□□□□ 0.58
POLR1DQ9Y2S0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1DQ9Y2S0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1DQ9Y2S0 MIR572-201ENST00000384983 95 ntBASIC18.68■□□□□ 0.58
POLR1DQ9Y2S0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR1DQ9Y2S0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.68■□□□□ 0.58
POLR1DQ9Y2S0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.68■□□□□ 0.58
POLR1DQ9Y2S0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR1DQ9Y2S0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.68■□□□□ 0.58
POLR1DQ9Y2S0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1DQ9Y2S0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
POLR1DQ9Y2S0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
POLR1DQ9Y2S0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
POLR1DQ9Y2S0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.67■□□□□ 0.58
POLR1DQ9Y2S0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms