Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.16■■□□□ 1.46
PCDHA6Q9UN73 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHA6Q9UN73 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA6Q9UN73 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA6Q9UN73 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.15■■□□□ 1.46
PCDHA6Q9UN73 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.15■■□□□ 1.46
PCDHA6Q9UN73 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA6Q9UN73 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA6Q9UN73 KRT18P11-201ENST00000435214 1283 ntBASIC24.15■■□□□ 1.46
PCDHA6Q9UN73 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA6Q9UN73 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA6Q9UN73 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA6Q9UN73 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
PCDHA6Q9UN73 Z98882.1-201ENST00000622160 2253 ntBASIC24.14■■□□□ 1.46
PCDHA6Q9UN73 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
PCDHA6Q9UN73 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.14■■□□□ 1.46
PCDHA6Q9UN73 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHA6Q9UN73 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHA6Q9UN73 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHA6Q9UN73 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHA6Q9UN73 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHA6Q9UN73 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.14■■□□□ 1.45
PCDHA6Q9UN73 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.14■■□□□ 1.45
PCDHA6Q9UN73 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.14■■□□□ 1.45
PCDHA6Q9UN73 AC080038.1-201ENST00000611274 1154 ntBASIC24.14■■□□□ 1.45
PCDHA6Q9UN73 BID-214ENST00000617586 542 ntTSL 5 BASIC24.14■■□□□ 1.45
PCDHA6Q9UN73 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHA6Q9UN73 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHA6Q9UN73 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHA6Q9UN73 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.14■■□□□ 1.45
PCDHA6Q9UN73 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHA6Q9UN73 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHA6Q9UN73 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
PCDHA6Q9UN73 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHA6Q9UN73 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.13■■□□□ 1.45
PCDHA6Q9UN73 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.13■■□□□ 1.45
PCDHA6Q9UN73 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.13■■□□□ 1.45
PCDHA6Q9UN73 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHA6Q9UN73 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHA6Q9UN73 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHA6Q9UN73 KRT18P20-201ENST00000548986 1279 ntBASIC24.13■■□□□ 1.45
PCDHA6Q9UN73 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDHA6Q9UN73 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
PCDHA6Q9UN73 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHA6Q9UN73 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 SLC7A5P2-201ENST00000553010 536 ntBASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 AC011767.1-201ENST00000617410 1153 ntBASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHA6Q9UN73 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA6Q9UN73 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA6Q9UN73 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PCDHA6Q9UN73 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA6Q9UN73 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA6Q9UN73 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.11■■□□□ 1.45
PCDHA6Q9UN73 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA6Q9UN73 STX5-203ENST00000394690 1568 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDHA6Q9UN73 AC061975.6-201ENST00000579045 1553 ntBASIC24.11■■□□□ 1.45
PCDHA6Q9UN73 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA6Q9UN73 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PCDHA6Q9UN73 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDHA6Q9UN73 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA6Q9UN73 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHA6Q9UN73 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 AC090192.1-201ENST00000517740 490 ntBASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 MFSD11-216ENST00000590393 1141 ntBASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 MYCNOS-205ENST00000641950 531 ntBASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
PCDHA6Q9UN73 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHA6Q9UN73 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHA6Q9UN73 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.09■■□□□ 1.45
PCDHA6Q9UN73 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.09■■□□□ 1.45
PCDHA6Q9UN73 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHA6Q9UN73 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
PCDHA6Q9UN73 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms