Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
TRMT13Q9NUP7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.2■■□□□ 1.3
TRMT13Q9NUP7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRMT13Q9NUP7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRMT13Q9NUP7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRMT13Q9NUP7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRMT13Q9NUP7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRMT13Q9NUP7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.2■■□□□ 1.3
TRMT13Q9NUP7 UNC93B4-201ENST00000505679 747 ntBASIC23.2■■□□□ 1.3
TRMT13Q9NUP7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRMT13Q9NUP7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
TRMT13Q9NUP7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRMT13Q9NUP7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 AC091799.1-201ENST00000422823 811 ntBASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.18■■□□□ 1.3
TRMT13Q9NUP7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.17■■□□□ 1.3
TRMT13Q9NUP7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
TRMT13Q9NUP7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TRMT13Q9NUP7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRMT13Q9NUP7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TRMT13Q9NUP7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.16■■□□□ 1.3
TRMT13Q9NUP7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.16■■□□□ 1.3
TRMT13Q9NUP7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.16■■□□□ 1.3
TRMT13Q9NUP7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.16■■□□□ 1.3
TRMT13Q9NUP7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
TRMT13Q9NUP7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRMT13Q9NUP7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.16■■□□□ 1.3
TRMT13Q9NUP7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRMT13Q9NUP7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.16■■□□□ 1.3
TRMT13Q9NUP7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 AC008403.3-201ENST00000598924 454 ntBASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 CYP2T3P-201ENST00000601990 817 ntBASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRMT13Q9NUP7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRMT13Q9NUP7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TRMT13Q9NUP7 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.14■■□□□ 1.3
TRMT13Q9NUP7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TRMT13Q9NUP7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRMT13Q9NUP7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms