Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 AIRN-201ENST00000601203 4374 ntBASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 AC011298.3-201ENST00000615796 283 ntBASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB16Q9NRJ7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 AL512631.2-201ENST00000604634 923 ntBASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 AC136469.2-201ENST00000623944 1028 ntBASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PCDHB16Q9NRJ7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB16Q9NRJ7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB16Q9NRJ7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.14■□□□□ 0.5
PCDHB16Q9NRJ7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB16Q9NRJ7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB16Q9NRJ7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB16Q9NRJ7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB16Q9NRJ7 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.14■□□□□ 0.49
PCDHB16Q9NRJ7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB16Q9NRJ7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB16Q9NRJ7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB16Q9NRJ7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHB16Q9NRJ7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB16Q9NRJ7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB16Q9NRJ7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDHB16Q9NRJ7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB16Q9NRJ7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 AP004607.7-201ENST00000527152 1677 ntBASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB16Q9NRJ7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 FEM1AP4-201ENST00000443167 1987 ntBASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 SERBP1P1-201ENST00000396021 1160 ntBASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDHB16Q9NRJ7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms