Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KLHL1Q9NR64 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
KLHL1Q9NR64 C11orf96-202ENST00000528572 1834 ntBASIC19.72■□□□□ 0.75
KLHL1Q9NR64 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KLHL1Q9NR64 AL137060.1-201ENST00000618151 2648 ntBASIC19.71■□□□□ 0.75
KLHL1Q9NR64 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL1Q9NR64 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL1Q9NR64 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL1Q9NR64 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.7■□□□□ 0.74
KLHL1Q9NR64 ID1-201ENST00000376105 1233 ntBASIC19.7■□□□□ 0.74
KLHL1Q9NR64 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL1Q9NR64 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.7■□□□□ 0.74
KLHL1Q9NR64 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.7■□□□□ 0.74
KLHL1Q9NR64 AC104187.1-201ENST00000607510 612 ntBASIC19.7■□□□□ 0.74
KLHL1Q9NR64 AC073111.5-205ENST00000641717 521 ntBASIC19.7■□□□□ 0.74
KLHL1Q9NR64 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
KLHL1Q9NR64 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.7■□□□□ 0.74
KLHL1Q9NR64 AP004607.7-201ENST00000527152 1677 ntBASIC19.7■□□□□ 0.74
KLHL1Q9NR64 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL1Q9NR64 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL1Q9NR64 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KLHL1Q9NR64 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 KRT87P-202ENST00000534226 1464 ntBASIC19.69■□□□□ 0.74
KLHL1Q9NR64 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
KLHL1Q9NR64 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.69■□□□□ 0.74
KLHL1Q9NR64 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 OR7E47P-201ENST00000546390 1422 ntBASIC19.68■□□□□ 0.74
KLHL1Q9NR64 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 CDCA4P2-201ENST00000441182 718 ntBASIC19.68■□□□□ 0.74
KLHL1Q9NR64 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL1Q9NR64 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL1Q9NR64 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.67■□□□□ 0.74
KLHL1Q9NR64 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
KLHL1Q9NR64 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
KLHL1Q9NR64 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL1Q9NR64 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL1Q9NR64 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.67■□□□□ 0.74
KLHL1Q9NR64 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL1Q9NR64 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms