Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GCM1Q9NP62 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GCM1Q9NP62 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GCM1Q9NP62 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GCM1Q9NP62 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
GCM1Q9NP62 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GCM1Q9NP62 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.92■□□□□ 0.46
GCM1Q9NP62 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
GCM1Q9NP62 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
GCM1Q9NP62 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.92■□□□□ 0.46
GCM1Q9NP62 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.92■□□□□ 0.46
GCM1Q9NP62 AC104564.3-201ENST00000582367 638 ntBASIC17.92■□□□□ 0.46
GCM1Q9NP62 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.92■□□□□ 0.46
GCM1Q9NP62 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GCM1Q9NP62 AC053503.5-201ENST00000601508 636 ntBASIC17.92■□□□□ 0.46
GCM1Q9NP62 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GCM1Q9NP62 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GCM1Q9NP62 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GCM1Q9NP62 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GCM1Q9NP62 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GCM1Q9NP62 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GCM1Q9NP62 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GCM1Q9NP62 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GCM1Q9NP62 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
GCM1Q9NP62 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GCM1Q9NP62 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.91■□□□□ 0.46
GCM1Q9NP62 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GCM1Q9NP62 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
GCM1Q9NP62 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GCM1Q9NP62 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GCM1Q9NP62 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.91■□□□□ 0.46
GCM1Q9NP62 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
GCM1Q9NP62 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.91■□□□□ 0.46
GCM1Q9NP62 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GCM1Q9NP62 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.91■□□□□ 0.46
GCM1Q9NP62 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.91■□□□□ 0.46
GCM1Q9NP62 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.91■□□□□ 0.46
GCM1Q9NP62 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.91■□□□□ 0.46
GCM1Q9NP62 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
GCM1Q9NP62 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
GCM1Q9NP62 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GCM1Q9NP62 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
GCM1Q9NP62 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GCM1Q9NP62 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.91■□□□□ 0.46
GCM1Q9NP62 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.91■□□□□ 0.46
GCM1Q9NP62 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.91■□□□□ 0.46
GCM1Q9NP62 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.91■□□□□ 0.46
GCM1Q9NP62 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GCM1Q9NP62 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
GCM1Q9NP62 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
GCM1Q9NP62 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
GCM1Q9NP62 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
GCM1Q9NP62 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.9■□□□□ 0.46
GCM1Q9NP62 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.9■□□□□ 0.46
GCM1Q9NP62 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GCM1Q9NP62 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GCM1Q9NP62 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GCM1Q9NP62 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GCM1Q9NP62 AC022517.1-201ENST00000592429 346 ntBASIC17.9■□□□□ 0.46
GCM1Q9NP62 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.9■□□□□ 0.46
GCM1Q9NP62 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GCM1Q9NP62 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
GCM1Q9NP62 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GCM1Q9NP62 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GCM1Q9NP62 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GCM1Q9NP62 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.89■□□□□ 0.46
GCM1Q9NP62 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
GCM1Q9NP62 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.89■□□□□ 0.45
GCM1Q9NP62 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GCM1Q9NP62 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GCM1Q9NP62 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GCM1Q9NP62 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GCM1Q9NP62 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GCM1Q9NP62 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.89■□□□□ 0.45
GCM1Q9NP62 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.89■□□□□ 0.45
GCM1Q9NP62 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.89■□□□□ 0.45
GCM1Q9NP62 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.89■□□□□ 0.45
GCM1Q9NP62 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GCM1Q9NP62 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.89■□□□□ 0.45
GCM1Q9NP62 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
GCM1Q9NP62 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.89■□□□□ 0.45
GCM1Q9NP62 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
GCM1Q9NP62 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.89■□□□□ 0.45
GCM1Q9NP62 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
GCM1Q9NP62 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GCM1Q9NP62 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
GCM1Q9NP62 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
GCM1Q9NP62 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
GCM1Q9NP62 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GCM1Q9NP62 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
GCM1Q9NP62 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
GCM1Q9NP62 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.88■□□□□ 0.45
GCM1Q9NP62 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms