Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLK4Q9HAZ1 AC097381.1-201ENST00000429019 1296 ntBASIC20.36■□□□□ 0.85
CLK4Q9HAZ1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLK4Q9HAZ1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLK4Q9HAZ1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLK4Q9HAZ1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.36■□□□□ 0.85
CLK4Q9HAZ1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 TPRG1LP1-201ENST00000598702 760 ntBASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 AL157384.1-201ENST00000445995 2473 ntBASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLK4Q9HAZ1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLK4Q9HAZ1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLK4Q9HAZ1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.34■□□□□ 0.85
CLK4Q9HAZ1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLK4Q9HAZ1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLK4Q9HAZ1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.34■□□□□ 0.85
CLK4Q9HAZ1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLK4Q9HAZ1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CLK4Q9HAZ1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLK4Q9HAZ1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLK4Q9HAZ1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.34■□□□□ 0.85
CLK4Q9HAZ1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 AP004607.7-201ENST00000527152 1677 ntBASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 MIR6084-201ENST00000622012 110 ntBASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.33■□□□□ 0.85
CLK4Q9HAZ1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLK4Q9HAZ1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.32■□□□□ 0.84
CLK4Q9HAZ1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CLK4Q9HAZ1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 AC005224.4-201ENST00000583262 1652 ntBASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CLK4Q9HAZ1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms