Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC30.65■■■□□ 2.5
SENP3Q9H4L4 MTATP6P17-201ENST00000431030 672 ntBASIC30.65■■■□□ 2.5
SENP3Q9H4L4 UNC93B4-201ENST00000505679 747 ntBASIC30.65■■■□□ 2.5
SENP3Q9H4L4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC30.65■■■□□ 2.5
SENP3Q9H4L4 MTDHP1-201ENST00000605323 784 ntBASIC30.65■■■□□ 2.5
SENP3Q9H4L4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SENP3Q9H4L4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SENP3Q9H4L4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
SENP3Q9H4L4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC30.64■■■□□ 2.5
SENP3Q9H4L4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
SENP3Q9H4L4 AC079089.2-201ENST00000531211 1277 ntBASIC30.64■■■□□ 2.5
SENP3Q9H4L4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SENP3Q9H4L4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC30.64■■■□□ 2.5
SENP3Q9H4L4 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC30.64■■■□□ 2.5
SENP3Q9H4L4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SENP3Q9H4L4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
SENP3Q9H4L4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC30.64■■■□□ 2.5
SENP3Q9H4L4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
SENP3Q9H4L4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SENP3Q9H4L4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SENP3Q9H4L4 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SENP3Q9H4L4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SENP3Q9H4L4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC30.63■■■□□ 2.49
SENP3Q9H4L4 ART2BP-201ENST00000453501 499 ntBASIC30.63■■■□□ 2.49
SENP3Q9H4L4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC30.63■■■□□ 2.49
SENP3Q9H4L4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC30.63■■■□□ 2.49
SENP3Q9H4L4 AC112220.4-201ENST00000604982 1263 ntBASIC30.63■■■□□ 2.49
SENP3Q9H4L4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC30.63■■■□□ 2.49
SENP3Q9H4L4 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC30.63■■■□□ 2.49
SENP3Q9H4L4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
SENP3Q9H4L4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
SENP3Q9H4L4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
SENP3Q9H4L4 ANOS2P-203ENST00000472227 1816 ntBASIC30.63■■■□□ 2.49
SENP3Q9H4L4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SENP3Q9H4L4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
SENP3Q9H4L4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
SENP3Q9H4L4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SENP3Q9H4L4 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC30.62■■■□□ 2.49
SENP3Q9H4L4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC30.62■■■□□ 2.49
SENP3Q9H4L4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC30.62■■■□□ 2.49
SENP3Q9H4L4 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC30.62■■■□□ 2.49
SENP3Q9H4L4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC30.62■■■□□ 2.49
SENP3Q9H4L4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC30.62■■■□□ 2.49
SENP3Q9H4L4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SENP3Q9H4L4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
SENP3Q9H4L4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC30.61■■■□□ 2.49
SENP3Q9H4L4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC30.61■■■□□ 2.49
SENP3Q9H4L4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC30.61■■■□□ 2.49
SENP3Q9H4L4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC30.61■■■□□ 2.49
SENP3Q9H4L4 AC006058.3-201ENST00000606217 1069 ntBASIC30.61■■■□□ 2.49
SENP3Q9H4L4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
SENP3Q9H4L4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
SENP3Q9H4L4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC30.61■■■□□ 2.49
SENP3Q9H4L4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SENP3Q9H4L4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SENP3Q9H4L4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SENP3Q9H4L4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SENP3Q9H4L4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
SENP3Q9H4L4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
SENP3Q9H4L4 AC096631.1-202ENST00000440162 917 ntTSL 2 BASIC30.6■■■□□ 2.49
SENP3Q9H4L4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC30.6■■■□□ 2.49
SENP3Q9H4L4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC30.6■■■□□ 2.49
SENP3Q9H4L4 KRT18P21-201ENST00000515767 1272 ntBASIC30.6■■■□□ 2.49
SENP3Q9H4L4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC30.6■■■□□ 2.49
SENP3Q9H4L4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC30.6■■■□□ 2.49
SENP3Q9H4L4 AC087272.1-201ENST00000523624 533 ntBASIC30.6■■■□□ 2.49
SENP3Q9H4L4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
SENP3Q9H4L4 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC30.6■■■□□ 2.49
SENP3Q9H4L4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC30.6■■■□□ 2.49
SENP3Q9H4L4 AC034229.4-201ENST00000607861 441 ntBASIC30.6■■■□□ 2.49
SENP3Q9H4L4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC30.6■■■□□ 2.49
SENP3Q9H4L4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SENP3Q9H4L4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 FAM210CP-201ENST00000445714 574 ntBASIC30.59■■■□□ 2.49
SENP3Q9H4L4 KRT18P20-201ENST00000548986 1279 ntBASIC30.59■■■□□ 2.49
SENP3Q9H4L4 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
SENP3Q9H4L4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
SENP3Q9H4L4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SENP3Q9H4L4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
SENP3Q9H4L4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC30.58■■■□□ 2.49
SENP3Q9H4L4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC30.58■■■□□ 2.49
SENP3Q9H4L4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC30.58■■■□□ 2.49
SENP3Q9H4L4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
SENP3Q9H4L4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC30.58■■■□□ 2.49
SENP3Q9H4L4 LINC00526-201ENST00000581067 1875 ntBASIC30.58■■■□□ 2.49
SENP3Q9H4L4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms