Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.28■□□□□ 0.84
TUBB1Q9H4B7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.28■□□□□ 0.84
TUBB1Q9H4B7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.28■□□□□ 0.84
TUBB1Q9H4B7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBB1Q9H4B7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBB1Q9H4B7 AC006128.1-201ENST00000624704 1661 ntBASIC20.28■□□□□ 0.84
TUBB1Q9H4B7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TUBB1Q9H4B7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBB1Q9H4B7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBB1Q9H4B7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TUBB1Q9H4B7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.27■□□□□ 0.83
TUBB1Q9H4B7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TUBB1Q9H4B7 AC009237.3-201ENST00000393279 1427 ntBASIC20.27■□□□□ 0.83
TUBB1Q9H4B7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
TUBB1Q9H4B7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.26■□□□□ 0.83
TUBB1Q9H4B7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TUBB1Q9H4B7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBB1Q9H4B7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.26■□□□□ 0.83
TUBB1Q9H4B7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.26■□□□□ 0.83
TUBB1Q9H4B7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBB1Q9H4B7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TUBB1Q9H4B7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBB1Q9H4B7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TUBB1Q9H4B7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBB1Q9H4B7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.26■□□□□ 0.83
TUBB1Q9H4B7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.26■□□□□ 0.83
TUBB1Q9H4B7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBB1Q9H4B7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBB1Q9H4B7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 AC008764.7-201ENST00000593779 1081 ntBASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBB1Q9H4B7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 AC099791.1-201ENST00000416440 715 ntBASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TUBB1Q9H4B7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 AC073314.1-201ENST00000568729 2216 ntBASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 AC005224.4-201ENST00000583262 1652 ntBASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.23■□□□□ 0.83
TUBB1Q9H4B7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms