Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.16■■□□□ 1.62
LSG1Q9H089 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.16■■□□□ 1.62
LSG1Q9H089 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.16■■□□□ 1.62
LSG1Q9H089 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
LSG1Q9H089 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LSG1Q9H089 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.15■■□□□ 1.62
LSG1Q9H089 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.15■■□□□ 1.62
LSG1Q9H089 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LSG1Q9H089 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LSG1Q9H089 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LSG1Q9H089 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
LSG1Q9H089 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LSG1Q9H089 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC25.15■■□□□ 1.62
LSG1Q9H089 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LSG1Q9H089 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LSG1Q9H089 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
LSG1Q9H089 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.14■■□□□ 1.62
LSG1Q9H089 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
LSG1Q9H089 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
LSG1Q9H089 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25.14■■□□□ 1.62
LSG1Q9H089 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.13■■□□□ 1.61
LSG1Q9H089 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LSG1Q9H089 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
LSG1Q9H089 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.13■■□□□ 1.61
LSG1Q9H089 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LSG1Q9H089 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LSG1Q9H089 CCDC92B-201ENST00000575506 885 ntBASIC25.13■■□□□ 1.61
LSG1Q9H089 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.13■■□□□ 1.61
LSG1Q9H089 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LSG1Q9H089 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.13■■□□□ 1.61
LSG1Q9H089 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
LSG1Q9H089 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
LSG1Q9H089 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC25.12■■□□□ 1.61
LSG1Q9H089 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LSG1Q9H089 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
LSG1Q9H089 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LSG1Q9H089 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.12■■□□□ 1.61
LSG1Q9H089 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.12■■□□□ 1.61
LSG1Q9H089 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC25.12■■□□□ 1.61
LSG1Q9H089 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LSG1Q9H089 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
LSG1Q9H089 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.12■■□□□ 1.61
LSG1Q9H089 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LSG1Q9H089 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
LSG1Q9H089 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.12■■□□□ 1.61
LSG1Q9H089 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LSG1Q9H089 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC25.12■■□□□ 1.61
LSG1Q9H089 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC25.12■■□□□ 1.61
LSG1Q9H089 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
LSG1Q9H089 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LSG1Q9H089 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LSG1Q9H089 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LSG1Q9H089 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LSG1Q9H089 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LSG1Q9H089 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.11■■□□□ 1.61
LSG1Q9H089 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.11■■□□□ 1.61
LSG1Q9H089 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.11■■□□□ 1.61
LSG1Q9H089 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.11■■□□□ 1.61
LSG1Q9H089 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LSG1Q9H089 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LSG1Q9H089 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
LSG1Q9H089 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
LSG1Q9H089 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.1■■□□□ 1.61
LSG1Q9H089 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LSG1Q9H089 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
LSG1Q9H089 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LSG1Q9H089 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.1■■□□□ 1.61
LSG1Q9H089 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
LSG1Q9H089 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LSG1Q9H089 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LSG1Q9H089 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LSG1Q9H089 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.1■■□□□ 1.61
LSG1Q9H089 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
LSG1Q9H089 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
LSG1Q9H089 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LSG1Q9H089 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LSG1Q9H089 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.09■■□□□ 1.61
LSG1Q9H089 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
LSG1Q9H089 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.09■■□□□ 1.61
LSG1Q9H089 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LSG1Q9H089 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LSG1Q9H089 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LSG1Q9H089 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.09■■□□□ 1.61
LSG1Q9H089 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.09■■□□□ 1.61
LSG1Q9H089 AC138907.5-202ENST00000569484 235 ntBASIC25.09■■□□□ 1.61
LSG1Q9H089 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.09■■□□□ 1.61
LSG1Q9H089 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
LSG1Q9H089 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC25.09■■□□□ 1.61
LSG1Q9H089 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
LSG1Q9H089 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LSG1Q9H089 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
LSG1Q9H089 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
LSG1Q9H089 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LSG1Q9H089 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LSG1Q9H089 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
LSG1Q9H089 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LSG1Q9H089 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
LSG1Q9H089 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.08■■□□□ 1.61
LSG1Q9H089 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LSG1Q9H089 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms