Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXP3Q9BZS1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
FOXP3Q9BZS1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.64■■□□□ 1.06
FOXP3Q9BZS1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.64■■□□□ 1.06
FOXP3Q9BZS1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
FOXP3Q9BZS1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.64■■□□□ 1.06
FOXP3Q9BZS1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
FOXP3Q9BZS1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.64■■□□□ 1.06
FOXP3Q9BZS1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
FOXP3Q9BZS1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
FOXP3Q9BZS1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
FOXP3Q9BZS1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXP3Q9BZS1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXP3Q9BZS1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXP3Q9BZS1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.64■■□□□ 1.05
FOXP3Q9BZS1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FOXP3Q9BZS1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.64■■□□□ 1.05
FOXP3Q9BZS1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FOXP3Q9BZS1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXP3Q9BZS1 FEM1AP1-201ENST00000431297 1995 ntBASIC21.63■■□□□ 1.05
FOXP3Q9BZS1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXP3Q9BZS1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXP3Q9BZS1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.63■■□□□ 1.05
FOXP3Q9BZS1 SLC47A1P1-202ENST00000449666 945 ntBASIC21.63■■□□□ 1.05
FOXP3Q9BZS1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.63■■□□□ 1.05
FOXP3Q9BZS1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
FOXP3Q9BZS1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXP3Q9BZS1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
FOXP3Q9BZS1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.63■■□□□ 1.05
FOXP3Q9BZS1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXP3Q9BZS1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXP3Q9BZS1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXP3Q9BZS1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXP3Q9BZS1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
FOXP3Q9BZS1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
FOXP3Q9BZS1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
FOXP3Q9BZS1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXP3Q9BZS1 TSPY26P-201ENST00000476365 1326 ntBASIC21.62■■□□□ 1.05
FOXP3Q9BZS1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXP3Q9BZS1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
FOXP3Q9BZS1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
FOXP3Q9BZS1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FOXP3Q9BZS1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.62■■□□□ 1.05
FOXP3Q9BZS1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FOXP3Q9BZS1 AP004607.7-201ENST00000527152 1677 ntBASIC21.62■■□□□ 1.05
FOXP3Q9BZS1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXP3Q9BZS1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXP3Q9BZS1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXP3Q9BZS1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXP3Q9BZS1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXP3Q9BZS1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXP3Q9BZS1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXP3Q9BZS1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXP3Q9BZS1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
FOXP3Q9BZS1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXP3Q9BZS1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXP3Q9BZS1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FOXP3Q9BZS1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXP3Q9BZS1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FOXP3Q9BZS1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
FOXP3Q9BZS1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
FOXP3Q9BZS1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.58■■□□□ 1.05
FOXP3Q9BZS1 LINC01006-201ENST00000333319 2292 ntBASIC21.58■■□□□ 1.05
FOXP3Q9BZS1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXP3Q9BZS1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXP3Q9BZS1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.58■■□□□ 1.05
FOXP3Q9BZS1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.58■■□□□ 1.05
FOXP3Q9BZS1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.58■■□□□ 1.05
FOXP3Q9BZS1 AP005435.1-201ENST00000529293 1178 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms