Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP3Q9BZ76 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.1■□□□□ 0.81
CNTNAP3Q9BZ76 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP3Q9BZ76 MMP23A-201ENST00000234610 1017 ntBASIC20.1■□□□□ 0.81
CNTNAP3Q9BZ76 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP3Q9BZ76 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP3Q9BZ76 KRT18P57-201ENST00000443599 1254 ntBASIC20.1■□□□□ 0.81
CNTNAP3Q9BZ76 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP3Q9BZ76 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.1■□□□□ 0.81
CNTNAP3Q9BZ76 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.1■□□□□ 0.81
CNTNAP3Q9BZ76 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CNTNAP3Q9BZ76 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP3Q9BZ76 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNTNAP3Q9BZ76 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 UPK3BP1-201ENST00000428678 509 ntBASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 MIR6786-201ENST00000616843 113 ntBASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 AL135905.2-201ENST00000584934 1404 ntBASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP3Q9BZ76 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.08■□□□□ 0.81
CNTNAP3Q9BZ76 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP3Q9BZ76 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP3Q9BZ76 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CNTNAP3Q9BZ76 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CNTNAP3Q9BZ76 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.08■□□□□ 0.81
CNTNAP3Q9BZ76 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP3Q9BZ76 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.08■□□□□ 0.81
CNTNAP3Q9BZ76 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.08■□□□□ 0.81
CNTNAP3Q9BZ76 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP3Q9BZ76 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP3Q9BZ76 AC004687.1-201ENST00000579003 1625 ntBASIC20.08■□□□□ 0.8
CNTNAP3Q9BZ76 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP3Q9BZ76 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 KRT18P56-201ENST00000507275 550 ntBASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.07■□□□□ 0.8
CNTNAP3Q9BZ76 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 SOX15-203ENST00000570788 1093 ntBASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 AC092368.3-202ENST00000574180 1591 ntBASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP3Q9BZ76 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.05■□□□□ 0.8
CNTNAP3Q9BZ76 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP3Q9BZ76 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.05■□□□□ 0.8
CNTNAP3Q9BZ76 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP3Q9BZ76 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP3Q9BZ76 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP3Q9BZ76 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CNTNAP3Q9BZ76 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP3Q9BZ76 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
CNTNAP3Q9BZ76 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP3Q9BZ76 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CNTNAP3Q9BZ76 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNTNAP3Q9BZ76 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.05■□□□□ 0.8
CNTNAP3Q9BZ76 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms