Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RSPO3Q9BXY4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
RSPO3Q9BXY4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
RSPO3Q9BXY4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RSPO3Q9BXY4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RSPO3Q9BXY4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RSPO3Q9BXY4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.38■□□□□ 0.69
RSPO3Q9BXY4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.38■□□□□ 0.69
RSPO3Q9BXY4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.38■□□□□ 0.69
RSPO3Q9BXY4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.38■□□□□ 0.69
RSPO3Q9BXY4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.38■□□□□ 0.69
RSPO3Q9BXY4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.38■□□□□ 0.69
RSPO3Q9BXY4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
RSPO3Q9BXY4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.38■□□□□ 0.69
RSPO3Q9BXY4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
RSPO3Q9BXY4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
RSPO3Q9BXY4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RSPO3Q9BXY4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RSPO3Q9BXY4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 LINC01521-201ENST00000504184 1943 ntBASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.37■□□□□ 0.69
RSPO3Q9BXY4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RSPO3Q9BXY4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO3Q9BXY4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO3Q9BXY4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO3Q9BXY4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO3Q9BXY4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
RSPO3Q9BXY4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.36■□□□□ 0.69
RSPO3Q9BXY4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.36■□□□□ 0.69
RSPO3Q9BXY4 AC012414.1-201ENST00000556676 535 ntBASIC19.36■□□□□ 0.69
RSPO3Q9BXY4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO3Q9BXY4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RSPO3Q9BXY4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RSPO3Q9BXY4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 AC073314.1-201ENST00000568729 2216 ntBASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 AC091305.1-201ENST00000479476 895 ntBASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 TPRG1LP1-201ENST00000598702 760 ntBASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RSPO3Q9BXY4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.34■□□□□ 0.69
RSPO3Q9BXY4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.34■□□□□ 0.69
RSPO3Q9BXY4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RSPO3Q9BXY4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.34■□□□□ 0.69
RSPO3Q9BXY4 AC006128.1-201ENST00000624704 1661 ntBASIC19.34■□□□□ 0.69
RSPO3Q9BXY4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RSPO3Q9BXY4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms