Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.71■□□□□ 0.91
CCM2Q9BSQ5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCM2Q9BSQ5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.71■□□□□ 0.91
CCM2Q9BSQ5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.71■□□□□ 0.91
CCM2Q9BSQ5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.71■□□□□ 0.91
CCM2Q9BSQ5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCM2Q9BSQ5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCM2Q9BSQ5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCM2Q9BSQ5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.71■□□□□ 0.91
CCM2Q9BSQ5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCM2Q9BSQ5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCM2Q9BSQ5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCM2Q9BSQ5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.7■□□□□ 0.9
CCM2Q9BSQ5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCM2Q9BSQ5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCM2Q9BSQ5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCM2Q9BSQ5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCM2Q9BSQ5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCM2Q9BSQ5 POU5F1P4-201ENST00000413175 1085 ntBASIC20.7■□□□□ 0.9
CCM2Q9BSQ5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.7■□□□□ 0.9
CCM2Q9BSQ5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 KRT18P20-201ENST00000548986 1279 ntBASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 AC137761.2-201ENST00000561729 223 ntBASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 AC145350.3-201ENST00000569033 163 ntBASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2Q9BSQ5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 AC061975.6-201ENST00000579045 1553 ntBASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 AC092666.2-201ENST00000613287 246 ntBASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 AC120498.10-201ENST00000621827 505 ntBASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCM2Q9BSQ5 Z98882.1-201ENST00000622160 2253 ntBASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 AC016769.1-201ENST00000409132 1010 ntBASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 KRT18P11-201ENST00000435214 1283 ntBASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2Q9BSQ5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2Q9BSQ5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.65■□□□□ 0.9
CCM2Q9BSQ5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms