Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.75■□□□□ 0.75
TUBA1CQ9BQE3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1CQ9BQE3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TUBA1CQ9BQE3 AL391422.3-201ENST00000603791 2761 ntBASIC19.75■□□□□ 0.75
TUBA1CQ9BQE3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1CQ9BQE3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1CQ9BQE3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1CQ9BQE3 AP005435.1-201ENST00000529293 1178 ntBASIC19.75■□□□□ 0.75
TUBA1CQ9BQE3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1CQ9BQE3 MIR6821-201ENST00000617625 74 ntBASIC19.75■□□□□ 0.75
TUBA1CQ9BQE3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1CQ9BQE3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1CQ9BQE3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBA1CQ9BQE3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
TUBA1CQ9BQE3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 AC097381.1-201ENST00000429019 1296 ntBASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 MIR5787-201ENST00000611784 55 ntBASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 FEM1AP1-201ENST00000431297 1995 ntBASIC19.74■□□□□ 0.75
TUBA1CQ9BQE3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.73■□□□□ 0.75
TUBA1CQ9BQE3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TUBA1CQ9BQE3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBA1CQ9BQE3 MIR572-201ENST00000384983 95 ntBASIC19.73■□□□□ 0.75
TUBA1CQ9BQE3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.73■□□□□ 0.75
TUBA1CQ9BQE3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.73■□□□□ 0.75
TUBA1CQ9BQE3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.73■□□□□ 0.75
TUBA1CQ9BQE3 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.73■□□□□ 0.75
TUBA1CQ9BQE3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TUBA1CQ9BQE3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TUBA1CQ9BQE3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBA1CQ9BQE3 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.72■□□□□ 0.75
TUBA1CQ9BQE3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBA1CQ9BQE3 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.72■□□□□ 0.75
TUBA1CQ9BQE3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TUBA1CQ9BQE3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.72■□□□□ 0.75
TUBA1CQ9BQE3 AC087623.3-201ENST00000607047 1098 ntBASIC19.72■□□□□ 0.75
TUBA1CQ9BQE3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.72■□□□□ 0.75
TUBA1CQ9BQE3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
TUBA1CQ9BQE3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TUBA1CQ9BQE3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TUBA1CQ9BQE3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.71■□□□□ 0.75
TUBA1CQ9BQE3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TUBA1CQ9BQE3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TUBA1CQ9BQE3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.7■□□□□ 0.74
TUBA1CQ9BQE3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBA1CQ9BQE3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBA1CQ9BQE3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBA1CQ9BQE3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.7■□□□□ 0.74
TUBA1CQ9BQE3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TUBA1CQ9BQE3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TUBA1CQ9BQE3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBA1CQ9BQE3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TUBA1CQ9BQE3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms