Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.62■□□□□ 0.41
CCL13Q99616 KRT19P1-201ENST00000405746 1186 ntBASIC17.62■□□□□ 0.41
CCL13Q99616 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.62■□□□□ 0.41
CCL13Q99616 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.62■□□□□ 0.41
CCL13Q99616 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CCL13Q99616 AP001160.3-201ENST00000601484 763 ntBASIC17.62■□□□□ 0.41
CCL13Q99616 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCL13Q99616 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCL13Q99616 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL13Q99616 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL13Q99616 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL13Q99616 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL13Q99616 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCL13Q99616 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.61■□□□□ 0.41
CCL13Q99616 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCL13Q99616 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCL13Q99616 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCL13Q99616 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.61■□□□□ 0.41
CCL13Q99616 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.61■□□□□ 0.41
CCL13Q99616 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.61■□□□□ 0.41
CCL13Q99616 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CCL13Q99616 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.61■□□□□ 0.41
CCL13Q99616 AC138907.5-202ENST00000569484 235 ntBASIC17.61■□□□□ 0.41
CCL13Q99616 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL13Q99616 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL13Q99616 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.61■□□□□ 0.41
CCL13Q99616 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCL13Q99616 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL13Q99616 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL13Q99616 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.61■□□□□ 0.41
CCL13Q99616 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCL13Q99616 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL13Q99616 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL13Q99616 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL13Q99616 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL13Q99616 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCL13Q99616 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.6■□□□□ 0.41
CCL13Q99616 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL13Q99616 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.6■□□□□ 0.41
CCL13Q99616 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.6■□□□□ 0.41
CCL13Q99616 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.6■□□□□ 0.41
CCL13Q99616 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL13Q99616 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.6■□□□□ 0.41
CCL13Q99616 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.6■□□□□ 0.41
CCL13Q99616 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL13Q99616 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL13Q99616 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL13Q99616 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.6■□□□□ 0.41
CCL13Q99616 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.6■□□□□ 0.41
CCL13Q99616 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL13Q99616 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL13Q99616 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL13Q99616 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.6■□□□□ 0.41
CCL13Q99616 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL13Q99616 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCL13Q99616 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCL13Q99616 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCL13Q99616 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.59■□□□□ 0.41
CCL13Q99616 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL13Q99616 AC010141.2-201ENST00000452426 721 ntBASIC17.59■□□□□ 0.41
CCL13Q99616 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.59■□□□□ 0.41
CCL13Q99616 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL13Q99616 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCL13Q99616 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL13Q99616 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL13Q99616 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CCL13Q99616 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCL13Q99616 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCL13Q99616 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.58■□□□□ 0.41
CCL13Q99616 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCL13Q99616 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCL13Q99616 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCL13Q99616 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCL13Q99616 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCL13Q99616 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CCL13Q99616 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL13Q99616 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL13Q99616 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL13Q99616 AC008175.2-201ENST00000612840 297 ntBASIC17.58■□□□□ 0.4
CCL13Q99616 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCL13Q99616 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL13Q99616 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL13Q99616 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.58■□□□□ 0.4
CCL13Q99616 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CCL13Q99616 Z98882.1-201ENST00000622160 2253 ntBASIC17.58■□□□□ 0.4
CCL13Q99616 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL13Q99616 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCL13Q99616 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCL13Q99616 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms