Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH15Q96QU1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDH15Q96QU1 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDH15Q96QU1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PCDH15Q96QU1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH15Q96QU1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH15Q96QU1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PCDH15Q96QU1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDH15Q96QU1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PCDH15Q96QU1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH15Q96QU1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH15Q96QU1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDH15Q96QU1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH15Q96QU1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.64■□□□□ 0.9
PCDH15Q96QU1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 AC139530.1-201ENST00000575312 1977 ntBASIC20.64■□□□□ 0.89
PCDH15Q96QU1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH15Q96QU1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH15Q96QU1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH15Q96QU1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDH15Q96QU1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH15Q96QU1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
PCDH15Q96QU1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH15Q96QU1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDH15Q96QU1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH15Q96QU1 AC137767.1-201ENST00000602918 1920 ntBASIC20.63■□□□□ 0.89
PCDH15Q96QU1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH15Q96QU1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDH15Q96QU1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH15Q96QU1 UBE2SP1-201ENST00000450587 669 ntBASIC20.63■□□□□ 0.89
PCDH15Q96QU1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH15Q96QU1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.63■□□□□ 0.89
PCDH15Q96QU1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH15Q96QU1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH15Q96QU1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 CYP2T3P-201ENST00000601990 817 ntBASIC20.61■□□□□ 0.89
PCDH15Q96QU1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH15Q96QU1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms