Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DUX3Q96PT4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX3Q96PT4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX3Q96PT4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX3Q96PT4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX3Q96PT4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DUX3Q96PT4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX3Q96PT4 AL355802.2-201ENST00000402069 882 ntBASIC16.32■□□□□ 0.2
DUX3Q96PT4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX3Q96PT4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DUX3Q96PT4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DUX3Q96PT4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.32■□□□□ 0.2
DUX3Q96PT4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
DUX3Q96PT4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.32■□□□□ 0.2
DUX3Q96PT4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.32■□□□□ 0.2
DUX3Q96PT4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX3Q96PT4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.32■□□□□ 0.2
DUX3Q96PT4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX3Q96PT4 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.32■□□□□ 0.2
DUX3Q96PT4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DUX3Q96PT4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.31■□□□□ 0.2
DUX3Q96PT4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
DUX3Q96PT4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 AC092053.2-201ENST00000640557 1818 ntBASIC16.31■□□□□ 0.2
DUX3Q96PT4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.31■□□□□ 0.2
DUX3Q96PT4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.31■□□□□ 0.2
DUX3Q96PT4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 AC007322.1-201ENST00000426983 750 ntBASIC16.31■□□□□ 0.2
DUX3Q96PT4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.31■□□□□ 0.2
DUX3Q96PT4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
DUX3Q96PT4 AC053503.5-201ENST00000601508 636 ntBASIC16.31■□□□□ 0.2
DUX3Q96PT4 AC104771.1-201ENST00000603335 964 ntBASIC16.31■□□□□ 0.2
DUX3Q96PT4 AL109923.1-201ENST00000618799 583 ntBASIC16.31■□□□□ 0.2
DUX3Q96PT4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DUX3Q96PT4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUX3Q96PT4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX3Q96PT4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DUX3Q96PT4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX3Q96PT4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX3Q96PT4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.3■□□□□ 0.2
DUX3Q96PT4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUX3Q96PT4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
DUX3Q96PT4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX3Q96PT4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.3■□□□□ 0.2
DUX3Q96PT4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DUX3Q96PT4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.3■□□□□ 0.2
DUX3Q96PT4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
DUX3Q96PT4 AL050303.2-201ENST00000619798 666 ntBASIC16.3■□□□□ 0.2
DUX3Q96PT4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DUX3Q96PT4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX3Q96PT4 AC003102.1-202ENST00000563394 1796 ntBASIC16.3■□□□□ 0.2
DUX3Q96PT4 AC127496.7-201ENST00000625110 1798 ntBASIC16.3■□□□□ 0.2
DUX3Q96PT4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX3Q96PT4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX3Q96PT4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.3■□□□□ 0.2
DUX3Q96PT4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUX3Q96PT4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DUX3Q96PT4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DUX3Q96PT4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX3Q96PT4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX3Q96PT4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX3Q96PT4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX3Q96PT4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.29■□□□□ 0.2
DUX3Q96PT4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
DUX3Q96PT4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.29■□□□□ 0.2
DUX3Q96PT4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX3Q96PT4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.29■□□□□ 0.2
DUX3Q96PT4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.29■□□□□ 0.2
DUX3Q96PT4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.29■□□□□ 0.2
DUX3Q96PT4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.29■□□□□ 0.2
DUX3Q96PT4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX3Q96PT4 AC005181.1-201ENST00000604782 1256 ntBASIC16.29■□□□□ 0.2
DUX3Q96PT4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
DUX3Q96PT4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.29■□□□□ 0.2
DUX3Q96PT4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX3Q96PT4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
DUX3Q96PT4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX3Q96PT4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DUX3Q96PT4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
DUX3Q96PT4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.29■□□□□ 0.2
DUX3Q96PT4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.29■□□□□ 0.2
DUX3Q96PT4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX3Q96PT4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DUX3Q96PT4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX3Q96PT4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
DUX3Q96PT4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DUX3Q96PT4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DUX3Q96PT4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms