Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CDHR1Q96JP9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDHR1Q96JP9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDHR1Q96JP9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDHR1Q96JP9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDHR1Q96JP9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.66■■□□□ 1.38
CDHR1Q96JP9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.66■■□□□ 1.38
CDHR1Q96JP9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.66■■□□□ 1.38
CDHR1Q96JP9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDHR1Q96JP9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CDHR1Q96JP9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.66■■□□□ 1.38
CDHR1Q96JP9 AC142086.2-201ENST00000569753 217 ntBASIC23.66■■□□□ 1.38
CDHR1Q96JP9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDHR1Q96JP9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.66■■□□□ 1.38
CDHR1Q96JP9 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.66■■□□□ 1.38
CDHR1Q96JP9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDHR1Q96JP9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.65■■□□□ 1.38
CDHR1Q96JP9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDHR1Q96JP9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDHR1Q96JP9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDHR1Q96JP9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.65■■□□□ 1.38
CDHR1Q96JP9 GUSBP6-202ENST00000438529 1198 ntBASIC23.65■■□□□ 1.38
CDHR1Q96JP9 AC245052.3-201ENST00000450182 901 ntBASIC23.65■■□□□ 1.38
CDHR1Q96JP9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CDHR1Q96JP9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.65■■□□□ 1.38
CDHR1Q96JP9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDHR1Q96JP9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDHR1Q96JP9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDHR1Q96JP9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CDHR1Q96JP9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.64■■□□□ 1.37
CDHR1Q96JP9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.64■■□□□ 1.37
CDHR1Q96JP9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CDHR1Q96JP9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.64■■□□□ 1.37
CDHR1Q96JP9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CDHR1Q96JP9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDHR1Q96JP9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDHR1Q96JP9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDHR1Q96JP9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
CDHR1Q96JP9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDHR1Q96JP9 AL512625.2-201ENST00000417533 625 ntBASIC23.63■■□□□ 1.37
CDHR1Q96JP9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDHR1Q96JP9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.63■■□□□ 1.37
CDHR1Q96JP9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDHR1Q96JP9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CDHR1Q96JP9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
CDHR1Q96JP9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.63■■□□□ 1.37
CDHR1Q96JP9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDHR1Q96JP9 C11orf96-202ENST00000528572 1834 ntBASIC23.63■■□□□ 1.37
CDHR1Q96JP9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.63■■□□□ 1.37
CDHR1Q96JP9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDHR1Q96JP9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDHR1Q96JP9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR1Q96JP9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDHR1Q96JP9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
CDHR1Q96JP9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDHR1Q96JP9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDHR1Q96JP9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.6■■□□□ 1.37
CDHR1Q96JP9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CDHR1Q96JP9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.6■■□□□ 1.37
CDHR1Q96JP9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDHR1Q96JP9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.6■■□□□ 1.37
CDHR1Q96JP9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.6■■□□□ 1.37
CDHR1Q96JP9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.6■■□□□ 1.37
CDHR1Q96JP9 AC012676.1-201ENST00000574705 1949 ntBASIC23.6■■□□□ 1.37
CDHR1Q96JP9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDHR1Q96JP9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDHR1Q96JP9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDHR1Q96JP9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms