Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITCHQ96J02 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.97■□□□□ 0.79
ITCHQ96J02 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITCHQ96J02 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITCHQ96J02 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ITCHQ96J02 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ITCHQ96J02 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.97■□□□□ 0.79
ITCHQ96J02 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITCHQ96J02 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.97■□□□□ 0.79
ITCHQ96J02 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITCHQ96J02 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ITCHQ96J02 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ITCHQ96J02 SMUG1P1-201ENST00000590640 811 ntBASIC19.97■□□□□ 0.79
ITCHQ96J02 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITCHQ96J02 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.97■□□□□ 0.79
ITCHQ96J02 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITCHQ96J02 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.97■□□□□ 0.79
ITCHQ96J02 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITCHQ96J02 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITCHQ96J02 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITCHQ96J02 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.97■□□□□ 0.79
ITCHQ96J02 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ITCHQ96J02 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ITCHQ96J02 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ITCHQ96J02 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ITCHQ96J02 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.96■□□□□ 0.79
ITCHQ96J02 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.96■□□□□ 0.79
ITCHQ96J02 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ITCHQ96J02 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ITCHQ96J02 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ITCHQ96J02 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.96■□□□□ 0.79
ITCHQ96J02 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
ITCHQ96J02 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ITCHQ96J02 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ITCHQ96J02 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ITCHQ96J02 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.96■□□□□ 0.79
ITCHQ96J02 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ITCHQ96J02 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ITCHQ96J02 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.95■□□□□ 0.79
ITCHQ96J02 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
ITCHQ96J02 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.95■□□□□ 0.78
ITCHQ96J02 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ITCHQ96J02 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ITCHQ96J02 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ITCHQ96J02 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ITCHQ96J02 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ITCHQ96J02 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ITCHQ96J02 BX842568.3-201ENST00000418104 571 ntBASIC19.95■□□□□ 0.78
ITCHQ96J02 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.95■□□□□ 0.78
ITCHQ96J02 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.95■□□□□ 0.78
ITCHQ96J02 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ITCHQ96J02 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.95■□□□□ 0.78
ITCHQ96J02 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.95■□□□□ 0.78
ITCHQ96J02 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ITCHQ96J02 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ITCHQ96J02 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ITCHQ96J02 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ITCHQ96J02 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.95■□□□□ 0.78
ITCHQ96J02 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ITCHQ96J02 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.95■□□□□ 0.78
ITCHQ96J02 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
ITCHQ96J02 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ITCHQ96J02 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ITCHQ96J02 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.94■□□□□ 0.78
ITCHQ96J02 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ITCHQ96J02 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.94■□□□□ 0.78
ITCHQ96J02 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ITCHQ96J02 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ITCHQ96J02 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
ITCHQ96J02 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.94■□□□□ 0.78
ITCHQ96J02 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.94■□□□□ 0.78
ITCHQ96J02 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.94■□□□□ 0.78
ITCHQ96J02 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.94■□□□□ 0.78
ITCHQ96J02 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ITCHQ96J02 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ITCHQ96J02 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ITCHQ96J02 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
ITCHQ96J02 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ITCHQ96J02 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ITCHQ96J02 FEM1AP1-201ENST00000431297 1995 ntBASIC19.94■□□□□ 0.78
ITCHQ96J02 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ITCHQ96J02 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ITCHQ96J02 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
ITCHQ96J02 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ITCHQ96J02 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ITCHQ96J02 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ITCHQ96J02 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.93■□□□□ 0.78
ITCHQ96J02 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.93■□□□□ 0.78
ITCHQ96J02 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.93■□□□□ 0.78
ITCHQ96J02 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ITCHQ96J02 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ITCHQ96J02 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.93■□□□□ 0.78
ITCHQ96J02 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ITCHQ96J02 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ITCHQ96J02 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ITCHQ96J02 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ITCHQ96J02 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
ITCHQ96J02 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.92■□□□□ 0.78
ITCHQ96J02 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ITCHQ96J02 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms